RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 NKX2-1P43699 371 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 SULT1A2P50226 295 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 RAB5CP51148 216 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 POLR2GP62487 172 aaKnown RBP eCLIP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 RAB11AP62491 216 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 RPL23AP62750 156 aaKnown RBP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 GRB2P62993 217 aaKnown RBP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 SLC35A1P78382 337 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 ECH1Q13011 328 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 ARL6IP1Q15041 203 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 PNLIPRP3Q17RR3 467 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 WDFY1Q8IWB7 410 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 OR5AS1Q8N127 324 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 CCDC71LQ8N9Z2 235 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 PLPP5Q8NEB5 264 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 OR1J1Q8NGS3 322 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 OR51H1Q8NH63 302 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 PTX4Q96A99 478 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 ALKBH3Q96Q83 286 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 RARRES2Q99969 163 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 MYOZ1Q9NP98 299 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 GNG13Q9P2W3 67 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 CARHSP1Q9Y2V2 147 aaKnown RBP5.78□□□□□ -1.48
CSDE1-203ENST00000358528 RFNGQ9Y644 331 aa5.78□□□□□ -1.48
CSDE1-203ENST00000358528 SHANK1Q9Y566 2161 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 IGKV1D-8A0A087WSZ0 117 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 CLPSP04118 112 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 FBP1P09467 338 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 HABP2Q14520 560 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 HMGN3Q15651 99 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 PIGYQ3MUY2 71 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 LCN15Q6UWW0 184 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 OR10S1Q8NGN2 331 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 OR10D4PQ8NGN7 298 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 OR14L1PQ8NHC6 308 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 CPNE4Q96A23 557 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 AQP10Q96PS8 301 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 CDCA3Q99618 268 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF251Q9BRH9 671 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 CFHR5Q9BXR6 569 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 PRO1933Q9H354 126 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 MOB1AQ9H8S9 216 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 PLEKHA2Q9HB19 425 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 KCNS2Q9ULS6 477 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 ST3GAL6Q9Y274 331 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 EML5Q05BV3 1969 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 IGHV1OR21-1A0A087WYE8 117 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 NSG1A0A0A6YYJ2 146 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF705GA8MUZ8 300 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 LDLRAD4O15165 306 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 IFNA5P01569 189 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 MELTFP08582 738 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 NR2C1P13056 603 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 B4GALT1P15291 398 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 EIF2S3P41091 472 aaKnown RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 FASLGP48023 281 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 SUPT4H1P63272 117 aaKnown RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 ALKBH2Q6NS38 261 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 DNM1P46Q6ZS02 220 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 POC1AQ8NBT0 407 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 NECAP1Q8NC96 275 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 SCGB1C1Q8TD33 95 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 MRPL38Q96DV4 380 aaKnown RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 UCN2Q96RP3 112 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 PRRG4Q9BZD6 226 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 TOLLIPQ9H0E2 274 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 COA4Q9NYJ1 87 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 ANXA10Q9UJ72 324 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 MCTS1Q9ULC4 181 aaKnown RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 LIPGQ9Y5X9 500 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 A0A1W2PQD3 144 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 LILRA5A6NI73 299 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 SERPINE3A8MV23 424 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 GEMIN2O14893 280 aaKnown RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 ATXN7O15265 892 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 MBPP02686 304 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-203ENST00000358528 S100GP29377 79 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 ALDH3B1P43353 468 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 EFNA3P52797 238 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 UBE2V2Q15819 145 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 VAX1Q5SQQ9 334 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 HIST2H3PS2Q5TEC6 136 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 BEND4Q6ZU67 534 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 OR52M1Q8NGK5 317 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 OXGR1Q96P68 337 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 NIPSNAP3BQ9BS92 247 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 SLC35B3Q9H1N7 401 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 GSN-AS1Q9NRJ2 163 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 WNT16Q9UBV4 365 aa5.77□□□□□ -1.49
CSDE1-203ENST00000358528 F8VVB4 439 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 F8VWA3 439 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 AP4M1O00189 453 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 MSTNO14793 375 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 FAM157CP0CG43 387 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 CD27P26842 260 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 RBP2P50120 134 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 CCR5P51681 352 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 RUNX1Q01196 453 aa5.76□□□□□ -1.49
CSDE1-203ENST00000358528 SMAD4Q13485 552 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms