RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SPSB2Q99619 263 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 HIST1H2BNQ99877 126 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 HIST1H2BMQ99879 126 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 PECRQ9BY49 303 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 NELFAQ9H3P2 528 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 FAM60AQ9NP50 221 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 CENPMQ9NSP4 180 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 FBXO7Q9Y3I1 522 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 LSM5Q9Y4Y9 91 aaKnown RBP9.34□□□□□ -0.91
CAPN3-205ENST00000357568 SPAG17Q6Q759 2223 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 TRBV23OR9-2A0A075B6M9 112 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 ZNF878C9JN71 531 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 HSD17B6O14756 317 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 LY86O95711 162 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 SRP19P09132 144 aaKnown RBP9.34□□□□□ -0.91
CAPN3-205ENST00000357568 RD3LP0DJH9 198 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 IL12BP29460 328 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 OR3A4PP47883 348 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 BLKP51451 505 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 ZNF133P52736 654 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-205ENST00000357568 ZNF674Q2M3X9 581 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 OTPQ5XKR4 325 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 LINC00346Q8IVM7 164 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 APCDD1LQ8NCL9 501 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 BEND2Q8NDZ0 799 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 OR5L2Q8NGL0 311 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 OR10D4PQ8NGN7 298 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 RNASEH2CQ8TDP1 164 aaKnown RBP9.34□□□□□ -0.91
CAPN3-205ENST00000357568 GPR119Q8TDV5 335 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 TMEM234Q8WY98 164 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 TSACCQ96A04 125 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-205ENST00000357568 MRPL24Q96A35 216 aaKnown RBP9.34□□□□□ -0.91
CAPN3-205ENST00000357568 RAB39BQ96DA2 213 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 NOL4LQ96MY1 436 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-205ENST00000357568 ARRDC1-AS1Q9H2J1 176 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 DOCK9Q9BZ29 2069 aa9.34□□□□□ -0.91
CAPN3-205ENST00000357568 A0A1W2PNV4 684 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 MS4A18H0YCH9 400 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 CRTAPO75718 401 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 HPNP05981 417 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 DUSP1P28562 367 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 RND2P52198 227 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 SQSTM1Q13501 440 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 TMEM187Q14656 261 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 RSU1Q15404 277 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 MS4A18Q3C1V0 323 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 H1FNTQ75WM6 255 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 RTN4RL2Q86UN3 420 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF761Q86XN6 746 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 SLC22A18ASQ8N1D0 253 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 SEMA6DQ8NFY4 1073 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 Q8WTZ3 238 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 C11orf40Q8WZ69 217 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 S100PBPQ96BU1 408 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 RBMXL1Q96E39 390 aaKnown RBP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 C18orf12Q96KH6 178 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 TGM7Q96PF1 710 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 ADOQ96SZ5 270 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 KLHDC3Q9BQ90 382 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 SMIM3Q9BZL3 60 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 NAA60Q9H7X0 242 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 TTC28Q96AY4 2481 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 NSG1A0A0A6YYJ2 146 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 H0Y8X5 98 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 PITX3O75364 302 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 TNFP01375 233 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 OR13C7P0DN81 318 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 TAGLN2P37802 199 aaKnown RBP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 UBE2KP61086 200 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 PNRC1Q12796 327 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 FZD2Q14332 565 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 Q6ZSR3 168 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 FOXRED2Q8IWF2 684 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 ST8SIA1Q92185 356 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 DAZLQ92904 295 aaKnown RBP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 ST6GALNAC5Q9BVH7 336 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 TBL1XR1Q9BZK7 514 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 WNT5BQ9H1J7 359 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 PADI1Q9ULC6 663 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 CBY1Q9Y3M2 126 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 PUS1Q9Y606 427 aaKnown RBP eCLIP9.33□□□□□ -0.92
CAPN3-205ENST00000357568 SLCO1B1Q9Y6L6 691 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 ABCA7Q8IZY2 2146 aa9.33□□□□□ -0.92
CAPN3-205ENST00000357568 DVL1O14640 695 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 ST8SIA3O43173 380 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 CER1O95813 267 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 KNG1P01042 644 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 HBE1P02100 147 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF883P0CG24 379 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 FOLR1P15328 257 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF43P17038 809 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 DTYMKP23919 212 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 SUMO3P55854 103 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-205ENST00000357568 CHAF1BQ13112 559 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 SSX2Q16385 188 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 KCNMB1Q16558 191 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 TMEM176BQ3YBM2 270 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-205ENST00000357568 KHDC3LQ587J8 217 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms