RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CARTPTQ16568 116 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 HFEQ30201 348 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 ASCL4Q6XD76 172 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 CDH24Q86UP0 819 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 POC1AQ8NBT0 407 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 OR6M1Q8NGM8 313 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 OR11L1Q8NGX0 322 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 NRIP2Q9BQI9 281 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 ELL3Q9HB65 397 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-202ENST00000357475 BEX4Q9NWD9 120 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-202ENST00000357475 IL36RNQ9UBH0 155 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 POLDIP2Q9Y2S7 368 aa21.34■■□□□ 1.01
SSBP3-202ENST00000357475 FLNBO75369 2602 aaKnown RBP21.34■■□□□ 1.01
SSBP3-202ENST00000357475 IGHV3OR15-7A0A075B7D8 119 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 AIPO00170 330 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 ERVK11-1P61568 191 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 PLA2G7Q13093 441 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 RIN1Q13671 783 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 OR10K2Q6IF99 312 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 METAP1DQ6UB28 335 aaPredicted RBP21.33■■□□□ 1
SSBP3-202ENST00000357475 MKXQ8IYA7 352 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 ZSCAN4Q8NAM6 433 aaPredicted RBP21.33■■□□□ 1
SSBP3-202ENST00000357475 PXT1Q8NFP0 134 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 ZNF671Q8TAW3 534 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 DYNC2LI1Q8TCX1 351 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 CEP19Q96LK0 163 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 NDUFA13Q9P0J0 144 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 STEAP1Q9UHE8 339 aa21.33■■□□□ 1
SSBP3-202ENST00000357475 SRRM5B3KS81 715 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 ZNF701M0R085 212 aaPredicted RBP21.32■■□□□ 1
SSBP3-202ENST00000357475 KDM4BO94953 1096 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 TFF1P04155 84 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 CFPP27918 469 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 CFHR2P36980 270 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 PSMD7P51665 324 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 MRPS11P82912 194 aaKnown RBP21.32■■□□□ 1
SSBP3-202ENST00000357475 ZNF181Q2M3W8 571 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 SLC22A6Q4U2R8 563 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 IDNKQ5T6J7 187 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 SFRP4Q6FHJ7 346 aaPredicted RBP21.32■■□□□ 1
SSBP3-202ENST00000357475 SAXO1Q8IYX7 474 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 OR51D1Q8NGF3 324 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 OR10Z1Q8NGY1 313 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 DGCR14Q96DF8 476 aaKnown RBP21.32■■□□□ 1
SSBP3-202ENST00000357475 MBD6Q96DN6 1003 aa21.32■■□□□ 1
SSBP3-202ENST00000357475 NOS1APO75052 506 aaPredicted RBP21.31■■□□□ 1
SSBP3-202ENST00000357475 TMEM104Q8NE00 496 aa21.31■■□□□ 1
SSBP3-202ENST00000357475 NINJ1Q92982 152 aa21.31■■□□□ 1
SSBP3-202ENST00000357475 LIN7BQ9HAP6 207 aa21.31■■□□□ 1
SSBP3-202ENST00000357475 DLL4Q9NR61 685 aa21.31■■□□□ 1
SSBP3-202ENST00000357475 TRAPPC2LH3BP13 241 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 PAHP00439 452 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 IRF2P14316 349 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 SNRPBP14678 240 aaKnown RBP21.3■■□□□ 1
SSBP3-202ENST00000357475 ZNF182P17025 639 aaPredicted RBP21.3■■□□□ 1
SSBP3-202ENST00000357475 SERPINA2P20848 420 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 QRFPP83859 136 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 AVPI1Q5T686 147 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 TBC1D15Q8TC07 691 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 HPS1Q92902 700 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 FAM46BQ96A09 425 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 FAM3DQ96BQ1 224 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 DCUN1D5Q9BTE7 237 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 METTL9Q9H1A3 318 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 HES4Q9HCC6 221 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 EDARQ9UNE0 448 aa21.3■■□□□ 1
SSBP3-202ENST00000357475 LRRC30A6NM36 301 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 HTR3BO95264 441 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 CYB5AP00167 134 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 VSIG8P0DPA2 414 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 GLRA1P23415 457 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 SNU13P55769 128 aaKnown RBP21.29■■□□□ 1
SSBP3-202ENST00000357475 RSU1Q15404 277 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 C2orf76Q3KRA6 126 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 DEFB108BQ8NET1 73 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 BANF2Q9H503 90 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 CHODLQ9H9P2 273 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 MAP1AP78559 2803 aaPredicted RBP21.29■■□□□ 1
SSBP3-202ENST00000357475 NXPH2O95156 264 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 ACAA1P09110 424 aaPredicted RBP21.29■■□□□ 1
SSBP3-202ENST00000357475 UNC119Q13432 240 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 ACP7Q6ZNF0 438 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 OR5T2Q8NGG2 359 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 EMG1Q92979 244 aaKnown RBP21.29■■□□□ 1
SSBP3-202ENST00000357475 S100A13Q99584 98 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 BARX1Q9HBU1 254 aaPredicted RBP21.29■■□□□ 1
SSBP3-202ENST00000357475 BATF3Q9NR55 127 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 OR5V1Q9UGF6 321 aa21.29■■□□□ 1
SSBP3-202ENST00000357475 ARSBP15848 533 aa21.28■■□□□ 1
SSBP3-202ENST00000357475 RORCP51449 518 aa21.28■■□□□ 1
SSBP3-202ENST00000357475 ZMYND11Q15326 602 aa21.28■■□□□ 1
SSBP3-202ENST00000357475 DGUOKQ16854 277 aa21.28■■□□□ 1
SSBP3-202ENST00000357475 OR5H6Q8NGV6 325 aa21.28■■□□□ 1
SSBP3-202ENST00000357475 IL36GQ9NZH8 169 aa21.28■■□□□ 1
SSBP3-202ENST00000357475 ZNF581Q9P0T4 197 aa21.28■■□□□ 1
SSBP3-202ENST00000357475 TMEM272A0A1B0GTI8 110 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 CLDN25C9JDP6 229 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 PPIHO43447 177 aaKnown RBP21.27■■□□□ 1
SSBP3-202ENST00000357475 BPNT1O95861 308 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 PRKACAP17612 351 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms