RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 PSMF1Q92530 271 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 RDH5Q92781 318 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 ZNF501Q96CX3 271 aaPredicted RBP6.01□□□□□ -1.45
RTN4-203ENST00000357376 CLCC1Q96S66 551 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 ANXA10Q9UJ72 324 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 A0A1B0GTI1 187 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 A0A1W2PPH5 198 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 ZNF724A8MTY0 619 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 GEMIN2O14893 280 aaKnown RBP6.01□□□□□ -1.45
RTN4-203ENST00000357376 VAMP5O95183 116 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 TCN2P20062 427 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 RPL23AP62750 156 aaKnown RBP6.01□□□□□ -1.45
RTN4-203ENST00000357376 FABP9Q0Z7S8 132 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 USF2Q15853 346 aaPredicted RBP6.01□□□□□ -1.45
RTN4-203ENST00000357376 PIGYQ3MUY2 71 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 LINC00518Q8N0U6 118 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 OSR2Q8N2R0 312 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 PAQR4Q8N4S7 273 aaPredicted RBP6.01□□□□□ -1.45
RTN4-203ENST00000357376 SMRP1Q8NCR6 262 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 SNIP1Q8TAD8 396 aaKnown RBP6.01□□□□□ -1.45
RTN4-203ENST00000357376 UBALD1Q8TB05 177 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 C19orf12Q9NSK7 152 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 DNAJB11Q9UBS4 358 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 MTCH2Q9Y6C9 303 aa6.01□□□□□ -1.45
RTN4-203ENST00000357376 IGKV3D-11A0A0A0MRZ8 115 aa6□□□□□ -1.45
RTN4-203ENST00000357376 A0A1B0GTQ1 180 aa6□□□□□ -1.45
RTN4-203ENST00000357376 FAM24AA6NFZ4 105 aa6□□□□□ -1.45
RTN4-203ENST00000357376 CD300LBA8K4G0 201 aa6□□□□□ -1.45
RTN4-203ENST00000357376 TMEM14DPA8MWL7 114 aa6□□□□□ -1.45
RTN4-203ENST00000357376 ZNF32P17041 273 aa6□□□□□ -1.45
RTN4-203ENST00000357376 GSK3AP49840 483 aa6□□□□□ -1.45
RTN4-203ENST00000357376 MEOX2P50222 304 aa6□□□□□ -1.45
RTN4-203ENST00000357376 PCBD1P61457 104 aa6□□□□□ -1.45
RTN4-203ENST00000357376 TGIF1Q15583 401 aa6□□□□□ -1.45
RTN4-203ENST00000357376 SHEQ5VZ18 495 aa6□□□□□ -1.45
RTN4-203ENST00000357376 KMT5CQ86Y97 462 aa6□□□□□ -1.45
RTN4-203ENST00000357376 NAT6Q93015 286 aa6□□□□□ -1.45
RTN4-203ENST00000357376 SLC26A1Q9H2B4 701 aa6□□□□□ -1.45
RTN4-203ENST00000357376 IFT22Q9H7X7 185 aa6□□□□□ -1.45
RTN4-203ENST00000357376 SLC2A8Q9NY64 477 aa6□□□□□ -1.45
RTN4-203ENST00000357376 ABI3Q9P2A4 366 aa6□□□□□ -1.45
RTN4-203ENST00000357376 NOSIPQ9Y314 301 aaKnown RBP6□□□□□ -1.45
RTN4-203ENST00000357376 CLDN16Q9Y5I7 305 aa6□□□□□ -1.45
RTN4-203ENST00000357376 CDRT15L2A8MXV6 281 aa6□□□□□ -1.45
RTN4-203ENST00000357376 TIAF1O95411 115 aa6□□□□□ -1.45
RTN4-203ENST00000357376 SLC34A2O95436 690 aa6□□□□□ -1.45
RTN4-203ENST00000357376 CLPSP04118 112 aa6□□□□□ -1.45
RTN4-203ENST00000357376 PGA4P0DJD7 388 aa6□□□□□ -1.45
RTN4-203ENST00000357376 PGA3P0DJD8 388 aa6□□□□□ -1.45
RTN4-203ENST00000357376 KLK2P20151 261 aa6□□□□□ -1.45
RTN4-203ENST00000357376 HAAOP46952 286 aa6□□□□□ -1.45
RTN4-203ENST00000357376 MECP2P51608 486 aaKnown RBP6□□□□□ -1.45
RTN4-203ENST00000357376 RAB11AP62491 216 aa6□□□□□ -1.45
RTN4-203ENST00000357376 ZP4Q12836 540 aa6□□□□□ -1.45
RTN4-203ENST00000357376 VAX1Q5SQQ9 334 aa6□□□□□ -1.45
RTN4-203ENST00000357376 AADACL3Q5VUY0 350 aa6□□□□□ -1.45
RTN4-203ENST00000357376 WDR5BQ86VZ2 330 aa6□□□□□ -1.45
RTN4-203ENST00000357376 SAT2Q96F10 170 aaPredicted RBP6□□□□□ -1.45
RTN4-203ENST00000357376 NIPSNAP3BQ9BS92 247 aa6□□□□□ -1.45
RTN4-203ENST00000357376 PHF7Q9BWX1 381 aaPredicted RBP6□□□□□ -1.45
RTN4-203ENST00000357376 TRAV20A0A0B4J274 112 aa6□□□□□ -1.45
RTN4-203ENST00000357376 TTLL8A6PVC2 850 aa6□□□□□ -1.45
RTN4-203ENST00000357376 FTCDNL1E5RQL4 147 aa6□□□□□ -1.45
RTN4-203ENST00000357376 MASP2O00187 686 aa6□□□□□ -1.45
RTN4-203ENST00000357376 CCL2P13500 99 aa6□□□□□ -1.45
RTN4-203ENST00000357376 ALDH3B1P43353 468 aa6□□□□□ -1.45
RTN4-203ENST00000357376 FHITP49789 147 aa6□□□□□ -1.45
RTN4-203ENST00000357376 TMEM50BP56557 158 aa6□□□□□ -1.45
RTN4-203ENST00000357376 TLE1Q04724 770 aa6□□□□□ -1.45
RTN4-203ENST00000357376 CSRP2Q16527 193 aa6□□□□□ -1.45
RTN4-203ENST00000357376 ETV3LQ6ZN32 361 aa6□□□□□ -1.45
RTN4-203ENST00000357376 HIST2H3AQ71DI3 136 aa6□□□□□ -1.45
RTN4-203ENST00000357376 VASH2Q86V25 355 aa6□□□□□ -1.45
RTN4-203ENST00000357376 OR11L1Q8NGX0 322 aa6□□□□□ -1.45
RTN4-203ENST00000357376 CPT1CQ8TCG5 803 aa6□□□□□ -1.45
RTN4-203ENST00000357376 TCEAL7Q9BRU2 100 aa6□□□□□ -1.45
RTN4-203ENST00000357376 NAA60Q9H7X0 242 aa6□□□□□ -1.45
RTN4-203ENST00000357376 GNG13Q9P2W3 67 aa6□□□□□ -1.45
RTN4-203ENST00000357376 PHF3Q92576 2039 aaKnown RBP5.99□□□□□ -1.45
RTN4-203ENST00000357376 DHRS7CA6NNS2 312 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 H0YIZ8 118 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 H7C1Q1 480 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 TRAF3IP2O43734 574 aaPredicted RBP5.99□□□□□ -1.45
RTN4-203ENST00000357376 NPIPB7O75200 414 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 HLA-HP01893 362 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 CCL3P10147 92 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 GLULP15104 373 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 CALCRP30988 508 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 PTGER4P35408 488 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 POLR2GP62487 172 aaKnown RBP eCLIP5.99□□□□□ -1.45
RTN4-203ENST00000357376 C4orf17Q53FE4 359 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 WIPI1Q5MNZ9 446 aaPredicted RBP5.99□□□□□ -1.45
RTN4-203ENST00000357376 LCN15Q6UWW0 184 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 OR5AS1Q8N127 324 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 ZNF561Q8N587 486 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 WDSUB1Q8N9V3 476 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 OR2M3Q8NG83 312 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 OR1F12Q8NHA8 337 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 GPHA2Q96T91 129 aa5.99□□□□□ -1.45
RTN4-203ENST00000357376 SVILO95425 2214 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms