RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 MUC20Q8N307 709 aaPredicted RBP10.46□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF426Q9BUY5 554 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 NMES1Q9C002 83 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 MYOZ1Q9NP98 299 aaPredicted RBP10.46□□□□□ -0.74
COL9A1-202ENST00000357250 FKBP11Q9NYL4 201 aa10.46□□□□□ -0.74
COL9A1-202ENST00000357250 YTHDF2Q9Y5A9 579 aaKnown RBP10.46□□□□□ -0.74
COL9A1-202ENST00000357250 CDC42EP2O14613 210 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 CDC14BO60729 498 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 WISP3O95389 354 aaPredicted RBP10.45□□□□□ -0.74
COL9A1-202ENST00000357250 CD1AP06126 327 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 CTSDP07339 412 aaPredicted RBP10.45□□□□□ -0.74
COL9A1-202ENST00000357250 CALCRP30988 508 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 GUK1Q16774 197 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 TIPARPQ7Z3E1 657 aaKnown RBP10.45□□□□□ -0.74
COL9A1-202ENST00000357250 PRSS42Q7Z5A4 293 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 BATF2Q8N1L9 274 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 TPPP3Q9BW30 176 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 CFHR5Q9BXR6 569 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 FBXO4Q9UKT5 387 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 AQP7O14520 342 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 SLC25A4P12235 298 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF32P17041 273 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 FMODQ06828 376 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 DEFB109BQ30KR1 87 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 OR2B11Q5JQS5 317 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 SIGLECL1Q8N7X8 197 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 RER1O15258 196 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 NDUFB3O43676 98 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 COX7A2P2O60397 106 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 MPC2O95563 127 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 MT-CO3P00414 261 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 NGFP01138 241 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 IFI6P09912 130 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 CTLA4P16410 223 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 ZNF766Q5HY98 468 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 KLHDC1Q8N7A1 406 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 ZBTB44Q8NCP5 570 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 C17orf47Q8NEP4 570 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 OR5D13Q8NGL4 314 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 PLSCR3Q9NRY6 295 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 FBXO34Q9NWN3 711 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 RTTNQ86VV8 2226 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 SRSF5Q13243 272 aaKnown RBP10.45□□□□□ -0.74
COL9A1-202ENST00000357250 PWWP2BQ6NUJ5 590 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 HSD17B13Q7Z5P4 300 aaPredicted RBP10.45□□□□□ -0.74
COL9A1-202ENST00000357250 ADTRPQ96IZ2 230 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 TMEM231Q9H6L2 316 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 GPR179Q6PRD1 2367 aa10.45□□□□□ -0.74
COL9A1-202ENST00000357250 TDRD15B5MCY1 1934 aaKnown RBP10.45□□□□□ -0.74
COL9A1-202ENST00000357250 CKAP5Q14008 2032 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 DGAT2L6Q6ZPD8 337 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 ASB10Q8WXI3 467 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 MRM2Q9UI43 246 aaKnown RBP10.44□□□□□ -0.74
COL9A1-202ENST00000357250 SCN4AP35499 1836 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 PRDX4Q13162 271 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 FZD5Q13467 585 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 MICBQ29980 383 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 COL13A1Q5TAT6 717 aaPredicted RBP10.44□□□□□ -0.74
COL9A1-202ENST00000357250 C19orf35Q6ZS72 473 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 V9GYS6 101 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 INHBBP09529 407 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 CT62P0C5K7 136 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 PSG6Q00889 435 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 FXNQ16595 210 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 PABPC1L2AQ5JQF8 200 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 B3GNTL1Q67FW5 361 aaPredicted RBP10.44□□□□□ -0.74
COL9A1-202ENST00000357250 D2HGDHQ8N465 521 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 SEMG1P04279 462 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 FGF2P09038 288 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 BTLAQ7Z6A9 289 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 C20orf196Q8IYI0 205 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 OR10D3Q8NH80 312 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 ABHD1Q96SE0 405 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 GPR87Q9BY21 358 aa10.44□□□□□ -0.74
COL9A1-202ENST00000357250 C3orf85A0A1B0GTC6 90 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 C1QCP02747 245 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 IL24Q13007 206 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 OR2Y1Q8NGV0 311 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 YIF1AO95070 293 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 C10orf111Q8N326 155 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 OR10V1Q8NGI7 309 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 OR2I1PQ8NGU4 316 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 RPS4Y2Q8TD47 263 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 GPR137Q96N19 417 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 GNRHR2Q96P88 292 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 SLC45A2Q9UMX9 530 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 WSB1Q9Y6I7 421 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 CLDN34H7C241 214 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 CA11O75493 328 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 SFTA3P0C7M3 94 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 MPLP40238 635 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 PPP1CBP62140 327 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 OR2C3Q8N628 320 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 PTX4Q96A99 478 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 MOGAT1Q96PD6 335 aa10.43□□□□□ -0.74
COL9A1-202ENST00000357250 SLC35B3Q9H1N7 401 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms