RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PRF1P14222 555 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 BCL3P20749 454 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 PRSS8Q16651 343 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 AGBL4Q5VU57 503 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 AMMECR1LQ6DCA0 310 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 OR8I2Q8N0Y5 310 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 OR2D2Q9H210 308 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 CXCL16Q9H2A7 254 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 EPXP11678 715 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 MMP11P24347 488 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 DSCR4P56555 118 aaPredicted RBP15.49■□□□□ 0.07
COL27A1-201ENST00000356083 GGTLC2Q14390 218 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 GPX8Q8TED1 209 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 PSORS1C1Q9UIG5 152 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 CBY1Q9Y3M2 126 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 DDX60Q8IY21 1712 aaKnown RBP15.49■□□□□ 0.07
COL27A1-201ENST00000356083 SYT14P1Q58G82 188 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 OR8B3Q8NGG8 313 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 OR8B2Q96RD0 313 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 C1QTNF3Q9BXJ4 246 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 TRAV17A0A0B4J275 112 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 C2CD4DB7Z1M9 353 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 COL19A1Q14993 1142 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 ATOH8Q96SQ7 321 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF385DQ9H6B1 395 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 INSIG2Q9Y5U4 225 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 FZD2Q14332 565 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 NUP188Q5SRE5 1749 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 CSNK1DP48730 415 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 PRSS12P56730 875 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 PYCR3Q53H96 274 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 PDPNQ86YL7 162 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 RSG1Q9BU20 258 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 ERRFI1Q9UJM3 462 aaPredicted RBP15.48■□□□□ 0.07
COL27A1-201ENST00000356083 SFTPCP11686 197 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 ANKRD36A6QL64 1941 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 M0R2Z0 102 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 FCN1O00602 326 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 MRGPRDQ8TDS7 321 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 CES1P1Q9UKY3 287 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 CNOT1A5YKK6 2376 aaKnown RBP15.48■□□□□ 0.07
COL27A1-201ENST00000356083 PF4V1P10720 104 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 GNG3P63215 75 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 TRAT1Q6PIZ9 186 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 WDR74Q6RFH5 385 aaPredicted RBP15.48■□□□□ 0.07
COL27A1-201ENST00000356083 OR13G1Q8NGZ3 307 aa15.48■□□□□ 0.07
COL27A1-201ENST00000356083 TRAV39A0A0B4J263 110 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 BTF3P20290 206 aaKnown RBP15.47■□□□□ 0.07
COL27A1-201ENST00000356083 CALCRP30988 508 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 CCR9P51686 369 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 FUT6P51993 359 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 LILRB4Q8NHJ6 448 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 RND1Q92730 232 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 DMRTA2Q96SC8 542 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 S1PR5Q9H228 398 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 FGF2P09038 288 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF502Q8TBZ5 544 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 M0R296 226 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 SOX8P57073 446 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 TMEM215Q68D42 235 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 MORN4Q8NDC4 146 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 A0A0A6YYJ9 748 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 SBK3P0C264 359 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 HLA-GP17693 338 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 ETV3LQ6ZN32 361 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 ORAI1Q96D31 301 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 POM121Q96HA1 1249 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 DAPP1Q9UN19 280 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 GEMIN2O14893 280 aaKnown RBP15.47■□□□□ 0.07
COL27A1-201ENST00000356083 TRIP6Q15654 476 aaKnown RBP15.47■□□□□ 0.07
COL27A1-201ENST00000356083 DOLPP1Q86YN1 238 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 TMEM99Q8N816 258 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 MMP25Q9NPA2 562 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 ASCL3Q9NQ33 180 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 TECRQ9NZ01 308 aaKnown RBP15.47■□□□□ 0.07
COL27A1-201ENST00000356083 A0A0B4J293 547 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 ATP6V1FQ16864 119 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 TMEM102Q8N9M5 508 aaPredicted RBP15.47■□□□□ 0.07
COL27A1-201ENST00000356083 BAHD1Q8TBE0 780 aaPredicted RBP15.47■□□□□ 0.07
COL27A1-201ENST00000356083 SCARB1Q8WTV0 552 aa15.47■□□□□ 0.07
COL27A1-201ENST00000356083 DIO1P49895 249 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 KLRB1Q12918 225 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 ISG20L2Q9H9L3 353 aaKnown RBP15.46■□□□□ 0.07
COL27A1-201ENST00000356083 SMAD7O15105 426 aaKnown RBP15.46■□□□□ 0.07
COL27A1-201ENST00000356083 NUDT8Q8WV74 236 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 SGK494Q96LW2 274 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 R4GMQ9 66 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 SLC37A1P57057 533 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 KTI12Q96EK9 354 aaPredicted RBP15.46■□□□□ 0.07
COL27A1-201ENST00000356083 H0YIG0 161 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 AKR7A2O43488 359 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 FGF17O60258 216 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 TCL1AP56279 114 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 C3AR1Q16581 482 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 R3HDMLQ9H3Y0 253 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 TUBA4BQ9H853 241 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 PRRT4C9JH25 899 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 TAAR5O14804 337 aa15.46■□□□□ 0.07
COL27A1-201ENST00000356083 COX6B1P14854 86 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms