RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 RNF133Q8WVZ7 376 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 SNRPGP15A8MWD9 76 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 ADAM20O43506 726 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 SNAPINO95295 136 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 LYG1Q8N1E2 194 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 WFDC6Q9BQY6 131 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 LAMP3Q9UQV4 416 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 SP6Q3SY56 376 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 POC1BQ8TC44 478 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 PSG11Q9UQ72 335 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 GMDSO60547 372 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 GCM2O75603 506 aaPredicted RBP13.12□□□□□ -0.31
COL17A1-201ENST00000353479 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
COL17A1-201ENST00000353479 C1QBP02746 253 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 ADH4P08319 380 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 UBE2KP61086 200 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 TMEM128Q5BJH2 165 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 FHL5Q5TD97 284 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 MRGPRDQ8TDS7 321 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 C2orf50Q96LR7 162 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF251Q9BRH9 671 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 PSENENQ9NZ42 101 aa13.12□□□□□ -0.31
COL17A1-201ENST00000353479 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 NCBP2LA6PVI3 153 aaKnown RBP13.11□□□□□ -0.31
COL17A1-201ENST00000353479 C1orf196B1AJZ1 125 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 CDIPTO14735 213 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF205O95201 554 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF528Q3MIS6 628 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 SLC25A30Q5SVS4 291 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 INO80CQ6PI98 192 aaPredicted RBP13.11□□□□□ -0.31
COL17A1-201ENST00000353479 SLC25A40Q8TBP6 338 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 KCNE5Q9UJ90 142 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 STRAPQ9Y3F4 350 aaKnown RBP13.11□□□□□ -0.31
COL17A1-201ENST00000353479 RPL12P30050 165 aaKnown RBP13.11□□□□□ -0.31
COL17A1-201ENST00000353479 MDH2P40926 338 aaKnown RBP13.11□□□□□ -0.31
COL17A1-201ENST00000353479 MOGAT3Q86VF5 341 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 OCEL1Q9H607 264 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF883P0CG24 379 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 S100A12P80511 92 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 ZP4Q12836 540 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 KRASP01116 189 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 IGHV3-13P01766 116 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 IGHV3-7P01780 117 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 SPNP16150 400 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 STUMQ69YW2 141 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 OR5D13Q8NGL4 314 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 ERGIC1Q969X5 290 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 CTHRC1Q96CG8 243 aa13.11□□□□□ -0.31
COL17A1-201ENST00000353479 OPN3Q9H1Y3 402 aaPredicted RBP13.11□□□□□ -0.31
COL17A1-201ENST00000353479 PDCD11Q14690 1871 aaKnown RBP13.1□□□□□ -0.31
COL17A1-201ENST00000353479 OR4C45A6NMZ5 311 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 COX7A1P24310 79 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 RAB1CQ92928 201 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 E5RGE8 158 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 PNPP00491 289 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 KRTCAP3Q53RY4 240 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF770Q6IQ21 691 aaPredicted RBP13.1□□□□□ -0.31
COL17A1-201ENST00000353479 ACOT7LQ6ZUV0 252 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 KCNRGQ8N5I3 272 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF441Q8N8Z8 693 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 MTFP1Q9UDX5 166 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 PRELID1Q9Y255 219 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 NSG2Q9Y328 171 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 K7ESF4 209 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 OR2F2O95006 317 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 OR2F1Q13607 317 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 SAP30LQ9HAJ7 183 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 SPTA1P02549 2419 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 GDF9O60383 454 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 M6PRP20645 277 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 FPR2P25090 351 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF239Q16600 458 aaKnown RBP13.1□□□□□ -0.31
COL17A1-201ENST00000353479 ADAM19Q9H013 955 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 TMPRSS2O15393 492 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 OR3A1P47881 315 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 PSMB3P49720 205 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 SCAND1P57086 179 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 RPEQ96AT9 228 aa13.1□□□□□ -0.31
COL17A1-201ENST00000353479 hADV38S2A0JD32 116 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 BCL3P20749 454 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 FAM214BQ7L5A3 538 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 CIB3Q96Q77 187 aaPredicted RBP13.09□□□□□ -0.31
COL17A1-201ENST00000353479 GAL3ST2Q9H3Q3 398 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 F6UZH7 168 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 CLEC3BP05452 202 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
COL17A1-201ENST00000353479 IGLV3-21P80748 117 aaPredicted RBP13.09□□□□□ -0.31
COL17A1-201ENST00000353479 FOXO1Q12778 655 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 PLA1AQ53H76 456 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 NHLRC1Q6VVB1 395 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 PPP1R32Q7Z5V6 425 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 GVQW1Q8N7I0 195 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 ZNF75AQ96N20 296 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 PECRQ9BY49 303 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 KLHDC2Q9Y2U9 406 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 TRAV38-1A0A0B4J264 116 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 H3BP45 60 aa13.09□□□□□ -0.31
COL17A1-201ENST00000353479 OR5G3P0C626 314 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms