RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ADAT3Q96EY9 351 aaPredicted RBP13.04□□□□□ -0.32
NUP50-201ENST00000347635 FAAP24Q9BTP7 215 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 IGHV3-9P01782 118 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 HLA-HP01893 362 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 NFYBP25208 207 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 RAB4BP61018 213 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 RPS23P62266 143 aaKnown RBP13.04□□□□□ -0.32
NUP50-201ENST00000347635 NTNG2Q96CW9 530 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 SLC35B3Q9H1N7 401 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 DYNLRB1Q9NP97 96 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 IGKV1D-42A0A075B6H8 117 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 OR6C6A6NF89 314 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 LIPT2A6NK58 231 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 KCNAB3O43448 404 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 GLAP06280 429 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 CTSDP07339 412 aaPredicted RBP13.04□□□□□ -0.32
NUP50-201ENST00000347635 HLA-DOBP13765 273 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 ARR3P36575 388 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 RPS11P62280 158 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUP50-201ENST00000347635 ACER2Q5QJU3 275 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 OR2A2Q6IF42 318 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 OR11L1Q8NGX0 322 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 CLDN23Q96B33 292 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 DEFB127Q9H1M4 99 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 SMOC1Q9H4F8 434 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 TMED3Q9Y3Q3 217 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
NUP50-201ENST00000347635 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 SP9P0CG40 484 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 SELEP16581 610 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 ROM1Q03395 351 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 SSX9Q7RTT3 188 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 SLC22A18ASQ8N1D0 253 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 LIN37Q96GY3 246 aaPredicted RBP13.03□□□□□ -0.32
NUP50-201ENST00000347635 TOLLIPQ9H0E2 274 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 B4GALT1P15291 398 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 ZBTB25P24278 435 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 RPS4XP62701 263 aaKnown RBP13.03□□□□□ -0.32
NUP50-201ENST00000347635 NAAAQ02083 359 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 FABP9Q0Z7S8 132 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 SLC25A26Q70HW3 274 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 THNSL2Q86YJ6 484 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 C9orf40Q8IXQ3 194 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 ZNF721Q8TF20 911 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 OBP2BQ9NPH6 170 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 TGOLN2O43493 480 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 BHLHE23Q8NDY6 225 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 THSD7BQ9C0I4 1608 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 DEGS1O15121 323 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 OR5AC1P0C628 307 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 ASCL1P50553 236 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 OR8G2PQ6IF36 304 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 SLC36A1Q7Z2H8 476 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 FBXL14Q8N1E6 418 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
NUP50-201ENST00000347635 ZNF816-ZNF321PA0A0X1KG74 233 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 DXOO77932 396 aaKnown RBP13.02□□□□□ -0.32
NUP50-201ENST00000347635 SCGB1D1O95968 90 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 CRYBA1P05813 215 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 SPP1P10451 314 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 NUBP1P53384 320 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 IL13RA2Q14627 380 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 RAB35Q15286 201 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 ZNF787Q6DD87 383 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 OR6X1Q8NH79 312 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 CT55Q8WUE5 264 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 ADAT1Q9BUB4 502 aaKnown RBP13.02□□□□□ -0.32
NUP50-201ENST00000347635 B3GAT1Q9P2W7 334 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 RNF150Q9ULK6 438 aa13.02□□□□□ -0.32
NUP50-201ENST00000347635 RD3LP0DJH9 198 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 HTD2P86397 168 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 ZNF260Q3ZCT1 412 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 OR1F12Q8NHA8 337 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 RGP1Q92546 391 aaPredicted RBP13.02□□□□□ -0.33
NUP50-201ENST00000347635 GAR1Q9NY12 217 aaKnown RBP13.02□□□□□ -0.33
NUP50-201ENST00000347635 PROCRQ9UNN8 238 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 E9PQ18 207 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 PNPP00491 289 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 AWAT1Q58HT5 328 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 ZNF429Q86V71 674 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 TECTBQ96PL2 329 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 OCIAD1Q9NX40 245 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 PIPOXQ9P0Z9 390 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 TCFL5Q9UL49 500 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 ONECUT2O95948 504 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 MPGP29372 298 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 ADAM19Q9H013 955 aa13.02□□□□□ -0.33
NUP50-201ENST00000347635 TRAV20A0A0B4J274 112 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 ABCD4O14678 606 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 TTRP02766 147 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 CLDN15P56746 228 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 SLC23A3Q6PIS1 610 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 DRAM2Q6UX65 266 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 PUSL1Q8N0Z8 303 aaKnown RBP13.01□□□□□ -0.33
NUP50-201ENST00000347635 AKR7LQ8NHP1 331 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 BTF3L4Q96K17 158 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms