RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 A0A1W2PR64 198 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 A0A1W2PRV1 198 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 H0YAE9 185 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 CASQ2O14958 399 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 PLATP00750 562 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 KNG1P01042 644 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 CD2P06729 351 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 ATF1P18846 271 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 EEF1B2P24534 225 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 PRDX2P32119 198 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 CAPGP40121 348 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 NANOS3P60323 173 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 OGFRL1Q5TC84 451 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 C9orf139Q6ZV77 190 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 OR5D14Q8NGL3 314 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 CNIH3Q8TBE1 160 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 TSEN15Q8WW01 171 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 APH1BQ8WW43 257 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 SLC25A28Q96A46 364 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 SDSLQ96GA7 329 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 NRIP2Q9BQI9 281 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 OR14J1Q9UGF5 321 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 PCDHGB5Q9Y5G0 923 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 IGKV1D-17A0A075B6S4 117 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 A0A1B0GW55 424 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 EFCAB10A6NFE3 127 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 OR4C45A6NMZ5 311 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 MAGEB3O15480 346 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 WBP4O75554 376 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 CLIC3O95833 236 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 SFTPBP07988 381 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4L2P0CJ85 424 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4L3P0CJ86 424 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4L4P0CJ87 422 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4L5P0CJ88 424 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4L6P0CJ89 424 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4L7P0CJ90 424 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 AZGP1P25311 298 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 POU3F4P49335 361 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 GUCA2AQ02747 115 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 SMN1Q16637 294 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DGUOKQ16854 277 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 CCDC58Q4VC31 144 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4L9Q6RFH8 374 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 C12orf54Q6X4T0 127 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 SLC25A26Q70HW3 274 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 CALHM1Q8IU99 346 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 SERPINA12Q8IW75 414 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 ZNRF1Q8ND25 227 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 LY6G5BQ8NDX9 201 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 C8orf46Q8TAG6 207 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 LHX4Q969G2 390 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 TMEM80Q96HE8 168 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 JAM3Q9BX67 310 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 VCX3BQ9H321 246 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 ISG20L2Q9H9L3 353 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 DUX4Q9UBX2 424 aa13.03□□□□□ -0.32
TSPAN4-201ENST00000346501 H0YHG0 523 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 CHRM2P08172 466 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 SELLP14151 372 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 AMY2BP19961 511 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 PRTN3P24158 256 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 ELF3P78545 371 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 ADARB1P78563 741 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 SLC34A1Q06495 639 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 RPL22L1Q6P5R6 122 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 BRD3OSQ6XYD6 125 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 C1orf122Q6ZSJ8 110 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 VMO1Q7Z5L0 202 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 FAM185AQ8N0U4 392 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 BCL6BQ8N143 479 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 ASCC1Q8N9N2 400 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 ZSCAN4Q8NAM6 433 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 EMG1Q92979 244 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 SLAMF9Q96A28 289 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 TBX15Q96SF7 602 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 FAM234AQ9H0X4 552 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 SIRPDQ9H106 197 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 ZCCHC4Q9H5U6 513 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 NOX4Q9NPH5 578 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 DIMT1Q9UNQ2 313 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 FAM96BQ9Y3D0 163 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 MXRA5Q9NR99 2828 aa13.02□□□□□ -0.33
TSPAN4-201ENST00000346501 IGHV1-69DA0A0B4J2H0 117 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 M0R1W7 72 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 INMTO95050 263 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 ZFPL1O95159 310 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 IGHV1-69P01742 117 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 HCKP08631 526 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 MMP9P14780 707 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 UBA52P62987 128 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 NCR3LG1Q68D85 454 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 STX19Q8N4C7 294 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 OR5D13Q8NGL4 314 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms