RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PPOXP50336 477 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 FAM3BP58499 235 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 ADPRHL1Q8NDY3 354 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 FGF22Q9HCT0 170 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 DDX60Q8IY21 1712 aaKnown RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 DNASE2O00115 360 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 FUT3P21217 361 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 GPR12P47775 334 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 EWSR1Q01844 656 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 C16orf82Q7Z2V1 217 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 ASB16Q96NS5 453 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 TMEM191AQ9H0A3 160 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 SLC52A3Q9NQ40 469 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 TGIF2-C20orf24A0A0A6YYL0 155 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 METTL12A8MUP2 240 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 IGHV3-9P01782 118 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 PGA4P0DJD7 388 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 PGA5P0DJD9 388 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 CCL5P13501 91 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 MMP9P14780 707 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 OR1L6Q8NGR2 347 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 TSPAN32Q96QS1 320 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 IGHV3-20A0A0C4DH32 117 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 TNFSF4P23510 183 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 ZFP36L2P47974 494 aaKnown RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 HINT1P49773 126 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 SUCLG1P53597 346 aaKnown RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 PAX5Q02548 391 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 TMEM255AQ5JRV8 349 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 RSPO2Q6UXX9 243 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 SMDT1Q9H4I9 107 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 MANBALQ9NQG1 85 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 TIMM10BQ9Y5J6 103 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 NPIPB9F8W1W9 429 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 PXNP49023 591 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 DUSP3P51452 185 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 GLRX5Q86SX6 157 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 STRADBQ9C0K7 418 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 DNAJB12Q9NXW2 375 aaKnown RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 OR5AC2Q9NZP5 309 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 CACNG5Q9UF02 275 aa10.79□□□□□ -0.68
COL12A1-202ENST00000345356 LTBP3Q9NS15 1303 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 FMODQ06828 376 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 NKAIN1Q4KMZ8 207 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 DHRS11Q6UWP2 260 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 OR2D3Q8NGH3 330 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 APH1AQ96BI3 265 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 RBM14Q96PK6 669 aaKnown RBP10.78□□□□□ -0.68
COL12A1-202ENST00000345356 ST6GALNAC2Q9UJ37 374 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 C11orf94C9JXX5 98 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 SCGB1C2P0DMR2 95 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 RPS4XP62701 263 aaKnown RBP10.78□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF124Q15973 351 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 MICBQ29980 383 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 ATG101Q9BSB4 218 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF835Q9Y2P0 537 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 RTL8AQ9BWD3 113 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 CCR2P41597 374 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 YPEL5P62699 121 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 KHDC3LQ587J8 217 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 ACSM6Q6P461 480 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 TAAR6Q96RI8 345 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 A0A0B4J293 547 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 KLK2P20151 261 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 ATP6V0CP27449 155 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 GJA4P35212 333 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 RPL13AP40429 203 aaKnown RBP10.78□□□□□ -0.68
COL12A1-202ENST00000345356 CAMPP49913 170 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 SUB1P53999 127 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL12A1-202ENST00000345356 TCTN1Q2MV58 587 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 MRGPRGQ86SM5 289 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 OR10AC1Q8NH08 325 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 ST8SIA1Q92185 356 aa10.78□□□□□ -0.68
COL12A1-202ENST00000345356 IGLV3-16A0A075B6K0 115 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 IGHV3-64DA0A0J9YX35 117 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 SH2D1BO14796 132 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 SOCS1O15524 211 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 EPPINO95925 133 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 CYB5R3P00387 301 aaPredicted RBP10.77□□□□□ -0.68
COL12A1-202ENST00000345356 HLA-GP17693 338 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 TCL1AP56279 114 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 TMEM251Q8N6I4 163 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 LINC00615Q96LM1 132 aaPredicted RBP10.77□□□□□ -0.68
COL12A1-202ENST00000345356 HSPB9Q9BQS6 159 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 GINS3Q9BRX5 216 aa10.77□□□□□ -0.68
COL12A1-202ENST00000345356 ZBTB25P24278 435 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 BPIFB3P59826 476 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 SPCS3P61009 180 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 DMWDQ09019 674 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 TGIF1Q15583 401 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 MLF2Q15773 248 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-202ENST00000345356 LIAT1Q6ZQX7 453 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 ZNF573Q86YE8 665 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 CNEP1R1Q8N9A8 125 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 FGF13Q92913 245 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 PCED1AQ9H1Q7 454 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 KIAA1456Q9P272 454 aa10.77□□□□□ -0.69
COL12A1-202ENST00000345356 S100A7P31151 101 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms