RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 XKR7Q5GH72 579 aa7.51□□□□□ -1.21
MCPH1-201ENST00000344683 CAMKMTQ7Z624 323 aa7.51□□□□□ -1.21
MCPH1-201ENST00000344683 RIMKLAQ8IXN7 391 aa7.51□□□□□ -1.21
MCPH1-201ENST00000344683 TAAR3PQ9P1P4 343 aa7.51□□□□□ -1.21
MCPH1-201ENST00000344683 DOCK11Q5JSL3 2073 aa7.51□□□□□ -1.21
MCPH1-201ENST00000344683 PLPP2O43688 288 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 HPXP02790 462 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ZNF121P58317 390 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ERV3-1Q14264 604 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 RNF165Q6ZSG1 346 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ZNF687Q8N1G0 1237 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 TMEM174Q8WUU8 243 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 OXGR1Q96P68 337 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 HINT3Q9NQE9 182 aaKnown RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 H3BQ15 152 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 M0QZQ0 153 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 HAAOP46952 286 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 JAG1P78504 1218 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 FAM209AQ5JX71 171 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ZNF385CQ66K41 422 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ASTLQ6HA08 431 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ADAMTSL4Q6UY14 1074 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 MAMSTRQ6ZN01 415 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 CTU1Q7Z7A3 348 aaKnown RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PIK3IP1Q96FE7 263 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 DOK1Q99704 481 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 FBXL17Q9UF56 701 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 TCRBV5S2A0A599 114 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 C7orf77A4D0Y5 90 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 TAPBPO15533 448 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 GLI4P10075 376 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 CYBAP13498 195 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 GABRA1P14867 456 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 NPBWR2P48146 333 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 IZUMO4Q1ZYL8 232 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 TMEM215Q68D42 235 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 OVCH2Q7RTZ1 564 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 OR2I1PQ8NGU4 316 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ROBO4Q8WZ75 1007 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ZC3HAV1LQ96H79 300 aaKnown RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 P2RY12Q9H244 342 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 TDRD15B5MCY1 1934 aaKnown RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 CXorf65A6NEN9 183 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 SCRG1O75711 98 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 FUT7Q11130 342 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PRDX4Q13162 271 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 HTR3DQ70Z44 454 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 RBM45Q8IUH3 476 aaKnown RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 BHLHE23Q8NDY6 225 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 STXBP6Q8NFX7 210 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 GMPPAQ96IJ6 420 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 TINAGL1Q9GZM7 467 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 AMMECR1Q9Y4X0 333 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PPP6CO00743 305 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 SLC2A10O95528 541 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 CA3P07451 260 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 AVPR2P30518 371 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PITX1P78337 314 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 ACSM5Q6NUN0 579 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 LIAT1Q6ZQX7 453 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 TMEM25Q86YD3 366 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 GSTZ1O43708 216 aaPredicted RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 AKR7A3O95154 331 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 DNAL4O96015 105 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 COL8A1P27658 744 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PTGER1P34995 402 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PPP1R1AQ13522 171 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PHOSPHO2Q8TCD6 241 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 PDXPQ96GD0 296 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 GAL3ST2Q9H3Q3 398 aa7.5□□□□□ -1.21
MCPH1-201ENST00000344683 COL14A1Q05707 1796 aaKnown RBP7.5□□□□□ -1.21
MCPH1-201ENST00000344683 H3BP45 60 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 SRSF10O75494 262 aaKnown RBP7.49□□□□□ -1.21
MCPH1-201ENST00000344683 RECKO95980 971 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 FUT3P21217 361 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 FGF8P55075 233 aaPredicted RBP7.49□□□□□ -1.21
MCPH1-201ENST00000344683 LRRC10Q5BKY1 277 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 SPNS3Q6ZMD2 512 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 TMEM40Q8WWA1 233 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 TMEM272A0A1B0GTI8 110 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 TMEM33P57088 247 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 ESPL1Q14674 2120 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 ELAVL1Q15717 326 aaKnown RBP7.49□□□□□ -1.21
MCPH1-201ENST00000344683 NKAIN1Q4KMZ8 207 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 GDE1Q9NZC3 331 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 SLC17A3O00476 420 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 KIR2DL1P43626 348 aaPredicted RBP7.49□□□□□ -1.21
MCPH1-201ENST00000344683 KIR2DL2P43627 348 aaPredicted RBP7.49□□□□□ -1.21
MCPH1-201ENST00000344683 COMPP49747 757 aaPredicted RBP7.49□□□□□ -1.21
MCPH1-201ENST00000344683 PFN3P60673 137 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 TWIST1Q15672 202 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 ZNF260Q3ZCT1 412 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 SAMD13Q5VXD3 122 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 MARCH3Q86UD3 253 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 CBLN2Q8IUK8 224 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 C9orf62Q8N4C0 152 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 ISOC2Q96AB3 205 aa7.49□□□□□ -1.21
MCPH1-201ENST00000344683 VN1R1Q9GZP7 353 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms