RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 WSB1Q9Y6I7 421 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 LAMA1P25391 3075 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 IGKV1-9A0A0C4DH69 117 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 CEACAM18A8MTB9 384 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 SRP19P09132 144 aaKnown RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 FUT3P21217 361 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF283Q8N7M2 679 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 NECAP1Q8NC96 275 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 HAS2Q92819 552 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 SHDQ96IW2 340 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 CCNL2Q96S94 520 aaPredicted RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 SLC25A31Q9H0C2 315 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 PLEKHJ1Q9NW61 149 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 TUBD1Q9UJT1 453 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 A6NCN8 305 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 K7N7A8 449 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 PLRG1O43660 514 aaKnown RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 MMP7P09237 267 aaPredicted RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 PLCXD2Q0VAA5 305 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 HIKESHIQ53FT3 197 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 WFIKKN1Q96NZ8 548 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 RPP25Q9BUL9 199 aaKnown RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 STRAPQ9Y3F4 350 aaKnown RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 DOCK8Q8NF50 2099 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 TLCD2A6NGC4 264 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 DBHP09172 617 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 UCP2P55851 309 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 TLE3Q04726 772 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 NUP54Q7Z3B4 507 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 RTN4IP1Q8WWV3 396 aaPredicted RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 RBM14Q96PK6 669 aaKnown RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 FAAP24Q9BTP7 215 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 PLA2G2FQ9BZM2 168 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 RNF208Q9H0X6 261 aa13.04□□□□□ -0.32
CLCN1-201ENST00000343257 FOXD3Q9UJU5 478 aaPredicted RBP13.04□□□□□ -0.32
CLCN1-201ENST00000343257 B4DGG1 531 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 E9PLN8 166 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 IFNL4K9M1U5 179 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 KLF8O95600 359 aaPredicted RBP13.03□□□□□ -0.32
CLCN1-201ENST00000343257 IFNA10P01566 189 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 APODP05090 189 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 RAB11AP62491 216 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
CLCN1-201ENST00000343257 DBX2Q6ZNG2 339 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 TVP23CQ96ET8 276 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 SHANK1Q9Y566 2161 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 BCAT2O15382 392 aaPredicted RBP13.03□□□□□ -0.32
CLCN1-201ENST00000343257 ANGPTL7O43827 346 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 MT-ATP6P00846 226 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 FCGR2AP12318 317 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 POLR2HP52434 150 aaKnown RBP13.03□□□□□ -0.32
CLCN1-201ENST00000343257 FBXW4P57775 412 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 FZD2Q14332 565 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 HIST2H3PS2Q5TEC6 136 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 SPSB3Q6PJ21 355 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 DNM1P34Q6PK57 102 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 SHISA6Q6ZSJ9 500 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 GPBAR1Q8TDU6 330 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 ASB10Q8WXI3 467 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 ARV1Q9H2C2 271 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 SOHLH2Q9NX45 425 aa13.03□□□□□ -0.32
CLCN1-201ENST00000343257 CRYM-AS1A6NIL9 109 aa13.02□□□□□ -0.32
CLCN1-201ENST00000343257 PHF1O43189 567 aaPredicted RBP13.02□□□□□ -0.32
CLCN1-201ENST00000343257 MAS1LP35410 378 aa13.02□□□□□ -0.32
CLCN1-201ENST00000343257 SLC6A8P48029 635 aa13.02□□□□□ -0.32
CLCN1-201ENST00000343257 EWSR1Q01844 656 aaKnown RBP eCLIP13.02□□□□□ -0.32
CLCN1-201ENST00000343257 KISS1Q15726 138 aa13.02□□□□□ -0.32
CLCN1-201ENST00000343257 WDR25Q64LD2 544 aaPredicted RBP13.02□□□□□ -0.32
CLCN1-201ENST00000343257 CHD9Q3L8U1 2897 aa13.02□□□□□ -0.32
CLCN1-201ENST00000343257 ZFP92A6NM28 416 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 COL9A1P20849 921 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 ICAM4Q14773 271 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 OR2AJ1Q8NGZ0 328 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 SPPL3Q8TCT6 385 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 GNG13Q9P2W3 67 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 CCDC187A0A096LP49 1063 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 FTCDNL1E5RQL4 147 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 ST8SIA3O43173 380 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 CSNK1A1P48729 337 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 HSF1Q00613 529 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 HHEXQ03014 270 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 TAF9Q16594 264 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 C5orf24Q7Z6I8 188 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 SUSD2Q9UGT4 822 aa13.02□□□□□ -0.33
CLCN1-201ENST00000343257 A6NIZ1 184 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 ZNF728P0DKX0 622 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 FAHP16930 419 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 ZNF17P17021 662 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 RAP1BP61224 184 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 HNF4GQ14541 408 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 YAF2Q8IY57 180 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 TMEM68Q96MH6 324 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 BCO1Q9HAY6 547 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 DCAF16Q9NXF7 216 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 OR14J1Q9UGF5 321 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms