RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SPP1P10451 314 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 TREM2Q9NZC2 230 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 NTMQ9P121 344 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 TPRP12270 2363 aaKnown RBP13.32□□□□□ -0.28
UBE3B-202ENST00000342494 CTLA4P16410 223 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 CDKN2AP42771 156 aaKnown RBP13.32□□□□□ -0.28
UBE3B-202ENST00000342494 LGALS7P47929 136 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 KIAA0040Q15053 153 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF629Q9UEG4 869 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-202ENST00000342494 PDCD6O75340 191 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 ISXQ2M1V0 245 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 BAP18Q8IXM2 172 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 PPP1R1CQ8WVI7 109 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 PTP4A1Q93096 173 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 C16orf97H3BN30 126 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 ANKRD34CP0C6C1 535 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 FPR2P25090 351 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 CALCRP30988 508 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 CDK5Q00535 292 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 OIT3Q8WWZ8 545 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 UQCC1Q9NVA1 299 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 TRAPPC4Q9Y296 219 aa13.32□□□□□ -0.28
UBE3B-202ENST00000342494 LSM2Q9Y333 95 aaKnown RBP13.32□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF260Q3ZCT1 412 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF788Q6ZQV5 615 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 C6orf201Q7Z4U5 140 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 MOGAT1Q96PD6 335 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 CACNA1CQ13936 2221 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 CCL3P10147 92 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 MED30Q96HR3 178 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 RHNO1Q9BSD3 238 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 MRPL22Q9NWU5 206 aaKnown RBP13.31□□□□□ -0.28
UBE3B-202ENST00000342494 APC2O95996 2303 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 G3V3Q6 166 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 LANCL1O43813 399 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-202ENST00000342494 OR10Z1Q8NGY1 313 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 A0A1W2PQD3 144 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 H3F3AP84243 136 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 TNXAQ16473 311 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 FAM162BQ5T6X4 162 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 DOCK2Q92608 1830 aa13.31□□□□□ -0.28
UBE3B-202ENST00000342494 SPINT1O43278 529 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 ZFPL1O95159 310 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 MPZL1O95297 269 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 FAM3AP98173 230 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 MOGAT3Q86VF5 341 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 OR52L2PQ8NGH6 319 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 CYR61O00622 381 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 FABP9Q0Z7S8 132 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 OR2M7Q8NG81 312 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 OR52B4Q8NGK2 314 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 HEXA-AS1Q9H8Q6 139 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 UCK1Q9HA47 277 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 C1RLQ9NZP8 487 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 KCNMB2Q9Y691 235 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 LY86O95711 162 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 HOXC8P31273 242 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 SSX7Q7RTT5 188 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 RASL11BQ9BPW5 248 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 TMEM231Q9H6L2 316 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 RAB18Q9NP72 206 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF275Q9NSD4 429 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-202ENST00000342494 F5H697 171 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 K7ESF4 209 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 FTH1P19P0C7X4 201 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 MPGP29372 298 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 MMP15P51511 669 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 PRSS12P56730 875 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 LINC00303Q3SY05 128 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 PTPMT1Q8WUK0 201 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-202ENST00000342494 ASB10Q8WXI3 467 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 YIPF6Q96EC8 236 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 WDR54Q9H977 334 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 FBXO8Q9NRD0 319 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 COA4Q9NYJ1 87 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 PAX5Q02548 391 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 NCR3LG1Q68D85 454 aa13.3□□□□□ -0.28
UBE3B-202ENST00000342494 FAM103A1Q9BTL3 118 aaKnown RBP13.3□□□□□ -0.28
UBE3B-202ENST00000342494 TMEM272A0A1B0GTI8 110 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF320A2RRD8 509 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 ONECUT2O95948 504 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 GP1BAP07359 652 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 MRPS11P82912 194 aaKnown RBP13.29□□□□□ -0.28
UBE3B-202ENST00000342494 DEFA6Q01524 100 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 FNDC7Q5VTL7 733 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 VSTM2LQ96N03 204 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 CFHR5Q9BXR6 569 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 WDR61Q9GZS3 305 aaKnown RBP13.29□□□□□ -0.28
UBE3B-202ENST00000342494 NUP205Q92621 2012 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 DNAJC13O75165 2243 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 LIPT2A6NK58 231 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 MS4A18H0YCH9 400 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 OPN1MWP04001 364 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 OPN1MW2P0DN77 364 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms