RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PHYHO14832 338 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 FAM87AP0C7U9 286 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 ZP4Q12836 540 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 SLC22A6Q4U2R8 563 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 SLC25A53Q5H9E4 307 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 CISD2Q8N5K1 135 aaKnown RBP11.42□□□□□ -0.58
COL18A1-201ENST00000342220 OR10S1Q8NGN2 331 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 MRPL13Q9BYD1 178 aaKnown RBP11.42□□□□□ -0.58
COL18A1-201ENST00000342220 POFUT1Q9H488 388 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 R4GMQ9 66 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 CACNA1DQ01668 2161 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 M0QYG6 137 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 TCAPO15273 167 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 ADCYAP1P18509 176 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 RBM39Q14498 530 aaKnown RBP11.41□□□□□ -0.58
COL18A1-201ENST00000342220 PEA15Q15121 130 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 PGAP1Q75T13 922 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 ST7LQ8TDW4 575 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 TCTEX1D2Q8WW35 142 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 SLC25A32Q9H2D1 315 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 BANF2Q9H503 90 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 SH2D2AQ9NP31 389 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 SPRR3Q9UBC9 169 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 PLCE1Q9P212 2302 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 EPG5Q9HCE0 2579 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 M0R135 149 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 NME2P1O60361 137 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF14P17017 642 aaPredicted RBP11.41□□□□□ -0.58
COL18A1-201ENST00000342220 NME2P22392 152 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 LHX2P50458 406 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 PDCD1Q15116 288 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 RHOUQ7L0Q8 258 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 RNF144BQ7Z419 303 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 TMED4Q7Z7H5 227 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 GABRG1Q8N1C3 465 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF799Q96GE5 643 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 MICU1Q9BPX6 476 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 ALX4Q9H161 411 aaPredicted RBP11.41□□□□□ -0.58
COL18A1-201ENST00000342220 ASF1BQ9NVP2 202 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 CXorf65A6NEN9 183 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 GJC3Q8NFK1 279 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 OR8B12Q8NGG6 310 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 GPX8Q8TED1 209 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 GGACTQ9BVM4 153 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 MFFQ9GZY8 342 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 NELFAQ9H3P2 528 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 TMEM231Q9H6L2 316 aa11.41□□□□□ -0.58
COL18A1-201ENST00000342220 TRAV17A0A0B4J275 112 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 C5orf49A4QMS7 147 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 IGFBP7Q16270 282 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 SEH1LQ96EE3 360 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 ADAT3Q96EY9 351 aaPredicted RBP11.4□□□□□ -0.58
COL18A1-201ENST00000342220 CPNE2Q96FN4 548 aaPredicted RBP11.4□□□□□ -0.58
COL18A1-201ENST00000342220 TLNRD1Q9H1K6 362 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF230Q9UIE0 474 aaPredicted RBP11.4□□□□□ -0.58
COL18A1-201ENST00000342220 CLDN18P56856 261 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 USF2Q15853 346 aaPredicted RBP11.4□□□□□ -0.58
COL18A1-201ENST00000342220 FAM166AQ6J272 317 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 FDX2Q6P4F2 183 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 ASB5Q8WWX0 329 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 SLAMF9Q96A28 289 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 CMBLQ96DG6 245 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 SLCO5A1Q9H2Y9 848 aa11.4□□□□□ -0.58
COL18A1-201ENST00000342220 HEATR1Q9H583 2144 aaKnown RBP11.4□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF587BE7ETH6 402 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 RAB3DO95716 219 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 IDH3GP51553 393 aaPredicted RBP11.39□□□□□ -0.59
COL18A1-201ENST00000342220 GFRA1P56159 465 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 H3F3AP84243 136 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 TEX30Q5JUR7 227 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 SLC25A47Q6Q0C1 308 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 SKA3Q8IX90 412 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF383Q8NA42 475 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 ABHD17AQ96GS6 310 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 S100A13Q99584 98 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 TREM1Q9NP99 234 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 GPR173Q9NS66 373 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 A0A1W2PNV4 684 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 MPIG6BO95866 241 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 TTRP02766 147 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF44P15621 663 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 CXADRP78310 365 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 NCMAPQ5T1S8 102 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 AWAT2Q6E213 333 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 OR5AS1Q8N127 324 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 ARRDC1Q8N5I2 433 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 OR52N4Q8NGI2 321 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 PIGCQ92535 297 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 HAS2Q92819 552 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 C14orf79Q96F83 325 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF629Q9UEG4 869 aaPredicted RBP11.39□□□□□ -0.59
COL18A1-201ENST00000342220 TNRC6AQ8NDV7 1962 aaKnown RBP11.39□□□□□ -0.59
COL18A1-201ENST00000342220 PCSK5Q92824 1860 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 HSPB2A8KAH6 182 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 AMY2AP04746 511 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 OR4E1P0C645 316 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF17P17021 662 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 HTR2CP28335 458 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms