RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 POC1BQ8TC44 478 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 ADAMTS17Q8TE56 1095 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 GIMAP1Q8WWP7 306 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 YIPF6Q96EC8 236 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 MIOXQ9UGB7 285 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 TMEM272A0A1B0GTI8 110 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 LGALS8O00214 317 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 SYNGR3O43761 229 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 IL18BPO95998 194 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 KITLGP21583 273 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 GNLYP22749 145 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 FPR2P25090 351 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 DERL3Q96Q80 235 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 MMP28Q9H239 520 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 POFUT1Q9H488 388 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 ATPIF1Q9UII2 106 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 MAB21L2Q9Y586 359 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 A0A1W2PPV4 95 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 ATP6V1G2-DDX39BF2Z307 99 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 GPR37O15354 613 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 XRCC3O43542 346 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 CEACAM6P40199 344 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 C1QTNF12Q5T7M4 302 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 C9orf106Q8NAJ2 232 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 CORO2AQ92828 525 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 ABCA7Q8IZY2 2146 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 TMEM200CA6NKL6 621 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 OR5H8P0DN80 308 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 IL7P13232 177 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 OR8G5Q8NG78 346 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 GPX8Q8TED1 209 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 OR2V2Q96R30 315 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 OGG1O15527 345 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 ERVFRD-1P60508 538 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 DMRTC1Q5HYR2 192 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 CD300LFQ8TDQ1 290 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 TMEM246Q9BRR3 403 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 ARL6Q9H0F7 186 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 RNF122Q9H9V4 155 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 TREM1Q9NP99 234 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 SLC52A3Q9NQ40 469 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 IGKV1D-42A0A075B6H8 117 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 IGHA1P01876 353 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 SEMG1P04279 462 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 NRN1LQ496H8 165 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 TEX30Q5JUR7 227 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 SHEQ5VZ18 495 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 ZFAND2BQ8WV99 257 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 CHST5Q9GZS9 411 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 ONECUT2O95948 504 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 BAXQ07812 192 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 FAM27E3Q08E93 113 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 CDH26Q8IXH8 852 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 OR52N4Q8NGI2 321 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 SCMH1Q96GD3 660 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 ZNF75AQ96N20 296 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 HES4Q9HCC6 221 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 SPRR3Q9UBC9 169 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 WIPI2Q9Y4P8 454 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 M0R1X1 148 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 DUSP1P28562 367 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 CCL8P80075 99 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 NAAAQ02083 359 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 GPR157Q5UAW9 335 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 TMEM65Q6PI78 240 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 BRICD5Q6PL45 260 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 PRSS45Q7RTY3 260 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 LYG1Q8N1E2 194 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 NUDCD2Q8WVJ2 157 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 ERGIC1Q969X5 290 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 PBDC1Q9BVG4 233 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 STARD10Q9Y365 291 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 IGHV3OR15-7A0A075B7D8 119 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 MPV17LQ2QL34 196 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 CEACAM21Q3KPI0 293 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 PRDM14Q9GZV8 571 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP54-201ENST00000339859 RNF150Q9ULK6 438 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 HIST1H1DP16402 221 aaKnown RBP8.85□□□□□ -0.99
USP54-201ENST00000339859 CD40P25942 277 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 TIMP3P35625 211 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 MMP16P51512 607 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 SDSLQ96GA7 329 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 ADTRPQ96IZ2 230 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 FYTTD1Q96QD9 318 aaKnown RBP8.85□□□□□ -0.99
USP54-201ENST00000339859 C20orf85Q9H1P6 137 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 TNFRSF19Q9NS68 423 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 DEPPQ9NTK1 212 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 RASL12Q9NYN1 266 aa8.85□□□□□ -0.99
USP54-201ENST00000339859 RBMX2Q9Y388 322 aaKnown RBP8.85□□□□□ -0.99
USP54-201ENST00000339859 NPIPB9F8W1W9 429 aa8.84□□□□□ -0.99
USP54-201ENST00000339859 RPA2P15927 270 aa8.84□□□□□ -0.99
USP54-201ENST00000339859 OR52I2Q8NH67 350 aa8.84□□□□□ -0.99
USP54-201ENST00000339859 MRGPRDQ8TDS7 321 aa8.84□□□□□ -0.99
USP54-201ENST00000339859 CNTD2Q9H8S5 307 aa8.84□□□□□ -0.99
USP54-201ENST00000339859 FRRS1LQ9P0K9 344 aa8.84□□□□□ -0.99
USP54-201ENST00000339859 NKX2-6A6NCS4 301 aa8.84□□□□□ -0.99
USP54-201ENST00000339859 A8MV72 311 aaPredicted RBP8.84□□□□□ -0.99
USP54-201ENST00000339859 TBX6O95947 436 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms