RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZNF550Q7Z398 422 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 BCORP1Q8N888 145 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 OR9K2Q8NGE7 335 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 OR51F2Q8NH61 342 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 ABHD3Q8WU67 409 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 BMFQ96LC9 184 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 RARRES2Q99969 163 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 HIPK2Q9H2X6 1198 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 CGGBP1Q9UFW8 167 aaPredicted RBP11.13□□□□□ -0.63
DFFB-202ENST00000339350 ABCA7Q8IZY2 2146 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 CDC14CA4D256 554 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 SERINC4A6NH21 518 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 ATXN7O15265 892 aaPredicted RBP11.13□□□□□ -0.63
DFFB-202ENST00000339350 TACSTD2P09758 323 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 CT45A8P0DMV1 189 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 CT45A9P0DMV2 189 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 MEP1BQ16820 701 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 CT45A2Q5DJT8 189 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 WDR38Q5JTN6 314 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 BAHD1Q8TBE0 780 aaPredicted RBP11.13□□□□□ -0.63
DFFB-202ENST00000339350 VSTM2LQ96N03 204 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 OR8B4Q96RC9 309 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 SMIM3Q9BZL3 60 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 PLSCR4Q9NRQ2 329 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 SLC5A6Q9Y289 635 aa11.13□□□□□ -0.63
DFFB-202ENST00000339350 MED12Q93074 2177 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 DCDC2BA2VCK2 349 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 A6NIZ1 184 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 OR4C45A6NMZ5 311 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 C1QL1O75973 258 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 WNT11O96014 354 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 NBEAP1P0C6P0 100 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 SLC35E2P0CK97 266 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 ZNF28P17035 718 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 PRSS3P35030 304 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 RPL18Q07020 188 aaKnown RBP11.12□□□□□ -0.63
DFFB-202ENST00000339350 SLC16A9Q7RTY1 509 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 COMMD1Q8N668 190 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 TSPAN32Q96QS1 320 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 LPAR4Q99677 370 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 TXN2Q99757 166 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 GINS3Q9BRX5 216 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 ZNF705FA8MVS1 300 aaPredicted RBP11.12□□□□□ -0.63
DFFB-202ENST00000339350 UMODP07911 640 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 ZNF705DP0CH99 300 aaPredicted RBP11.12□□□□□ -0.63
DFFB-202ENST00000339350 ZNF705BP0CI00 300 aaPredicted RBP11.12□□□□□ -0.63
DFFB-202ENST00000339350 CEACAM1P13688 526 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 AKR1C4P17516 323 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 COMPP49747 757 aaPredicted RBP11.12□□□□□ -0.63
DFFB-202ENST00000339350 PRPS1P60891 318 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 TRIM61Q5EBN2 209 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 PRSS57Q6UWY2 283 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 GBGT1Q8N5D6 347 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 OR5L2Q8NGL0 311 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 SLC17A5Q9NRA2 495 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 NUP210LQ5VU65 1888 aa11.12□□□□□ -0.63
DFFB-202ENST00000339350 XKRY2A2RUG3 117 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 ANKUB1A6NFN9 424 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 XKRYO14609 159 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 ARPC3O15145 178 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 NDUFB8O95169 186 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 ABHD16AO95870 558 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 TDGF1P13385 188 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 LMO1P25800 156 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 EGR4Q05215 589 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 WDFY1Q8IWB7 410 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 APCDD1LQ8NCL9 501 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 OR4X1Q8NH49 305 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 FAM71F1Q96KD3 344 aaPredicted RBP11.11□□□□□ -0.63
DFFB-202ENST00000339350 ARV1Q9H2C2 271 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 FOXD3Q9UJU5 478 aaPredicted RBP11.11□□□□□ -0.63
DFFB-202ENST00000339350 TMED7Q9Y3B3 224 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 A0A1W2PQF6 199 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 FITM1A5D6W6 292 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 RAB27BO00194 218 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 TNFSF14O43557 240 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 MELTFP08582 738 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 FUT3P21217 361 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 RAB38P57729 211 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 ZNF74Q16587 644 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 RPUSD3Q6P087 351 aaKnown RBP11.11□□□□□ -0.63
DFFB-202ENST00000339350 MED25Q71SY5 747 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 FAM3DQ96BQ1 224 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 SLC35E1Q96K37 410 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 ELOVL3Q9HB03 270 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 LRFN1Q9P244 771 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 MRPS18BQ9Y676 258 aaKnown RBP11.11□□□□□ -0.63
DFFB-202ENST00000339350 FOXS1O43638 330 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 ZNF41P51814 821 aaPredicted RBP11.11□□□□□ -0.63
DFFB-202ENST00000339350 RAC3P60763 192 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 COL10A1Q03692 680 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 P2RY6Q15077 328 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 CNN3Q15417 329 aaKnown RBP11.11□□□□□ -0.63
DFFB-202ENST00000339350 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 MRPL52Q86TS9 123 aaKnown RBP11.11□□□□□ -0.63
DFFB-202ENST00000339350 CDC20BQ86Y33 519 aa11.11□□□□□ -0.63
DFFB-202ENST00000339350 FAM89BQ8N5H3 189 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms