RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CAB39Q9Y376 341 aaPredicted RBP10.88□□□□□ -0.67
NUDCD3-201ENST00000338427 SF3B6Q9Y3B4 125 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-201ENST00000338427 ANKRD61A6NGH8 418 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 METTL15A6NJ78 407 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 J3QT63 122 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 DLGAP1O14490 977 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 NOS1APO75052 506 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 BMXP51813 675 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 ERVK11-1P61568 191 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 RPL31P62899 125 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 ZNF85Q03923 595 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 EGR3Q06889 387 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 BLMHQ13867 455 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 MIDNQ504T8 468 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 TP53I3Q53FA7 332 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 DHRS7BQ6IAN0 325 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 ZNF782Q6ZMW2 699 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 GDPGP1Q6ZNW5 385 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 Q6ZSR3 168 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 RNF144BQ7Z419 303 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 PIFOQ8TCI5 191 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 C16orf95Q9H693 158 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 TCF7L1Q9HCS4 588 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 OAZ3Q9UMX2 235 aa10.87□□□□□ -0.67
NUDCD3-201ENST00000338427 TSPAN9O75954 239 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 TSPAN15O95858 294 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 TK1P04183 234 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 KRT8P05787 483 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 OR2T7P0C7T2 308 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 DUSP1P28562 367 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 HTR1FP30939 366 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 KIR3DL2P43630 455 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 ACTR3P61158 418 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 COL10A1Q03692 680 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 ZIK1Q3SY52 487 aaPredicted RBP10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 PLA1AQ53H76 456 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 LDLRAD2Q5SZI1 272 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 NCR3LG1Q68D85 454 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 GID4Q8IVV7 300 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 BEND2Q8NDZ0 799 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 PYDC1Q8WXC3 89 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 SLAMF9Q96A28 289 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 MNTQ99583 582 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 OSBPL10Q9BXB5 764 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 MEGF9Q9H1U4 602 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 HES4Q9HCC6 221 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 IL36RNQ9UBH0 155 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 WARS2Q9UGM6 360 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 FOXJ3Q9UPW0 622 aa10.86□□□□□ -0.67
NUDCD3-201ENST00000338427 TRBV23-1A0A0A0MS06 115 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 TMEM82A0PJX8 343 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 BTBD17A6NE02 478 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 SLC1A7O00341 560 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 SYT7O43581 403 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 JUNBP17275 347 aaPredicted RBP10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 CCL1P22362 96 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 MPZP25189 248 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 ATP6V1E1P36543 226 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 TGFBR2P37173 567 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 NPBWR2P48146 333 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 DLX6P56179 175 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 RPL15P61313 204 aaKnown RBP10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 ACSM1Q08AH1 577 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 SMIM21Q3B7S5 101 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 PDLIM3Q53GG5 364 aaPredicted RBP10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 C1QL4Q86Z23 238 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 ZNF561Q8N587 486 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 TPRX1Q8N7U7 411 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 OR5D13Q8NGL4 314 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 CENPNQ96H22 339 aaPredicted RBP10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 PRRG3Q9BZD7 231 aa10.85□□□□□ -0.67
NUDCD3-201ENST00000338427 K7N7A8 449 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 ENTPD6O75354 484 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 SNU13P55769 128 aaKnown RBP10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 CRIP3Q6Q6R5 217 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 CCBE1Q6UXH8 406 aaPredicted RBP10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 SLC25A26Q70HW3 274 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 OR52N4Q8NGI2 321 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 ITFG2Q969R8 447 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 ADAT3Q96EY9 351 aaPredicted RBP10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 ADI1Q9BV57 179 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 HEXA-AS1Q9H8Q6 139 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 MOB1AQ9H8S9 216 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 GNG8Q9UK08 70 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 SLC7A11Q9UPY5 501 aa10.84□□□□□ -0.67
NUDCD3-201ENST00000338427 IGKV1-9A0A0C4DH69 117 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 M0QZ24 198 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 TIMM23O14925 209 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 CHST1O43916 411 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 ZNF737O75373 536 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 IGHA1P01876 353 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 FUT6P51993 359 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 EDDM3BP56851 147 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 OR12D2P58182 307 aa10.83□□□□□ -0.68
NUDCD3-201ENST00000338427 NANOS3P60323 173 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms