RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 TRAPPC2LH3BP13 241 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
SEC13-201ENST00000337354 TNFRSF13BO14836 293 aaPredicted RBP12.87□□□□□ -0.35
SEC13-201ENST00000337354 WNT9BO14905 357 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 SMAD7O15105 426 aaKnown RBP12.87□□□□□ -0.35
SEC13-201ENST00000337354 TMEM225BP0DP42 221 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 CD37P11049 281 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 EGR1P18146 543 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
SEC13-201ENST00000337354 CD80P33681 288 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 PTGFRP43088 359 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 RANBP1P43487 201 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
SEC13-201ENST00000337354 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 ASCL4Q6XD76 172 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 LRRTM1Q86UE6 522 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 COX4I2Q96KJ9 171 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 PATZ1Q9HBE1 687 aaKnown RBP12.87□□□□□ -0.35
SEC13-201ENST00000337354 HES4Q9HCC6 221 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 PCDHB16Q9NRJ7 776 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 NLKQ9UBE8 527 aa12.87□□□□□ -0.35
SEC13-201ENST00000337354 MAP1AP78559 2803 aaPredicted RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 PDCD5O14737 125 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 SPRY1O43609 319 aaPredicted RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 ZNF780AO75290 641 aaPredicted RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 KDM4BO94953 1096 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 NXPH2O95156 264 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 PLATP00750 562 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 TFAP2AP05549 437 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 RBMXP38159 391 aaKnown RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 BMXP51813 675 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 LMO4P61968 165 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 LYPD6Q86Y78 171 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 CIARTQ8N365 385 aaPredicted RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 JAGN1Q8N5M9 183 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 OR5D18Q8NGL1 313 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 OR13F1Q8NGS4 319 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 TNFAIP8L1Q8WVP5 186 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 SLAMF9Q96A28 289 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 RFT1Q96AA3 541 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 S100A13Q99584 98 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 ZNF665Q9H7R5 613 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 SEBOXQ9HB31 216 aaPredicted RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 SMURF1Q9HCE7 757 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 EXOSC4Q9NPD3 245 aaKnown RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 TXNL4BQ9NX01 149 aaKnown RBP12.86□□□□□ -0.35
SEC13-201ENST00000337354 KAAG1Q9UBP8 84 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 GHRLQ9UBU3 117 aa12.86□□□□□ -0.35
SEC13-201ENST00000337354 OR2AT4A6NND4 320 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 CEACAM18A8MTB9 384 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 KNG1P01042 644 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 IGHV2-5P01817 119 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 WNT2P09544 360 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 ADRA2CP18825 462 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 MYL9P24844 172 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 GPR176Q14439 515 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 C22orf42Q6IC83 251 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 FIP1L1Q6UN15 594 aaKnown RBP12.85□□□□□ -0.35
SEC13-201ENST00000337354 NLRC3Q7RTR2 1065 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 RNF144BQ7Z419 303 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 C19orf18Q8NEA5 215 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 Q8NFD4 153 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 C1orf159Q96HA4 380 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 ZNF488Q96MN9 340 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 OR51E2Q9H255 320 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 NARFLQ9H6Q4 476 aa12.85□□□□□ -0.35
SEC13-201ENST00000337354 CHD3Q12873 2000 aaKnown RBP12.85□□□□□ -0.35
SEC13-201ENST00000337354 CR1P17927 2039 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 IGKV1-12A0A0C4DH73 117 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 ANGPTL7O43827 346 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 IGKV1D-12P01611 117 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 GYPAP02724 150 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 INHBBP09529 407 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 GADD45AP24522 165 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 NPBWR2P48146 333 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 ALDH3B2P48448 385 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 GZMKP49863 264 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 GMFBP60983 142 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 HOXA4Q00056 320 aaPredicted RBP12.84□□□□□ -0.35
SEC13-201ENST00000337354 TMEM249Q2WGJ8 235 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 C1orf100Q5SVJ3 147 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 STUMQ69YW2 141 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 ELP2Q6IA86 826 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 TPRA1Q86W33 373 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 FAM58AQ8N1B3 248 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 ANGPTL6Q8NI99 470 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 SEH1LQ96EE3 360 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 NEIL1Q96FI4 390 aaPredicted RBP12.84□□□□□ -0.35
SEC13-201ENST00000337354 MED30Q96HR3 178 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 CHCHD6Q9BRQ6 235 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 FAM192AQ9GZU8 254 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 METTL9Q9H1A3 318 aa12.84□□□□□ -0.35
SEC13-201ENST00000337354 CNTD2Q9H8S5 307 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms