RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 OR2AK2Q8NG84 335 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 OR52H1Q8NGJ2 320 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 GPN1Q9HCN4 374 aaPredicted RBP10.9□□□□□ -0.66
LIMK1-201ENST00000336180 V9GYS6 101 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 C13orf42A0A1B0GVH6 325 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 MPC2O95563 127 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 APOC1P02654 83 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 CSTBP04080 98 aaKnown RBP10.9□□□□□ -0.66
LIMK1-201ENST00000336180 MMP7P09237 267 aaPredicted RBP10.9□□□□□ -0.66
LIMK1-201ENST00000336180 ERVS71-1P61550 626 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 DHRS2Q13268 280 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 P4HA3Q7Z4N8 544 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 TMEM229BQ8NBD8 167 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 PLEKHJ1Q9NW61 149 aa10.9□□□□□ -0.66
LIMK1-201ENST00000336180 OR6C6A6NF89 314 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 EEF1E1-BLOC1S5C9J1V9 151 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 K7EM74 188 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 KNG1P01042 644 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 CXCL2P19875 107 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 GRK1Q15835 563 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 AARDQ4LEZ3 155 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 DRAM2Q6UX65 266 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 FBXL14Q8N1E6 418 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 STEAP2Q8NFT2 490 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 C15orf40Q8WUR7 153 aa10.9□□□□□ -0.67
LIMK1-201ENST00000336180 OR14I1A6ND48 311 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 SLC22A20A6NK97 555 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 AGFG2O95081 481 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 SERPINA5P05154 406 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 THBS4P35443 961 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 TNFSF10P50591 281 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 GPM6AP51674 278 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 CAPZA1P52907 286 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 SLC25A26Q70HW3 274 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 DMRTC2Q8IXT2 367 aaPredicted RBP10.89□□□□□ -0.67
LIMK1-201ENST00000336180 SCP2D1Q9UJQ7 156 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 FZR1Q9UM11 496 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 KALRNO60229 2985 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 SPTBN4Q9H254 2564 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 A0A0U1RQV5 110 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 RAB6AP20340 208 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
LIMK1-201ENST00000336180 SCAND1P57086 179 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 RPS27AP62979 156 aaKnown RBP10.89□□□□□ -0.67
LIMK1-201ENST00000336180 HAS2Q92819 552 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 WDYHV1Q96HA8 205 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 GPHA2Q96T91 129 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 PDCD10Q9BUL8 212 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 PECRQ9BY49 303 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 EHFQ9NZC4 300 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
LIMK1-201ENST00000336180 MSTNO14793 375 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 HOXD4P09016 255 aaPredicted RBP10.88□□□□□ -0.67
LIMK1-201ENST00000336180 RAC2P15153 192 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 RAB14P61106 215 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 SLAMF9Q96A28 289 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 URM1Q9BTM9 101 aaKnown RBP10.88□□□□□ -0.67
LIMK1-201ENST00000336180 MPTX1A8MV57 137 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 DISC1C4P0D8 188 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 GATCO43716 136 aaKnown RBP10.88□□□□□ -0.67
LIMK1-201ENST00000336180 IGLV3-1P01715 115 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 TPOP07202 933 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 GLRA1P23415 457 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 CTSSP25774 331 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 CFPP27918 469 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 IDH3GP51553 393 aaPredicted RBP10.88□□□□□ -0.67
LIMK1-201ENST00000336180 RAB12Q6IQ22 244 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 UBALD1Q8TB05 177 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 FGF23Q9GZV9 251 aaPredicted RBP10.88□□□□□ -0.67
LIMK1-201ENST00000336180 SHANK1Q9Y566 2161 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 DHRS7CA6NNS2 312 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 CD37P11049 281 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 PRF1P14222 555 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 OR3A2P47893 321 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 FXYD4P59646 89 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 CLEC2AQ6UVW9 174 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 TMEM17Q86X19 198 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 C17orf78Q8N4C9 275 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 C12orf45Q8N5I9 185 aaPredicted RBP10.88□□□□□ -0.67
LIMK1-201ENST00000336180 ZFP62Q8NB50 900 aaPredicted RBP10.88□□□□□ -0.67
LIMK1-201ENST00000336180 OR51F2Q8NH61 342 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 ACKR4Q9NPB9 350 aa10.88□□□□□ -0.67
LIMK1-201ENST00000336180 POLEQ07864 2286 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 CDRT15L2A8MXV6 281 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 OR7C1O76099 320 aaPredicted RBP10.87□□□□□ -0.67
LIMK1-201ENST00000336180 IL18BPO95998 194 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 PGAM2P15259 253 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 OR2T2Q6IF00 324 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 OR56B1Q8NGI3 324 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 TOMM40LQ969M1 308 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 SULT4A1Q9BR01 284 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 KLF2Q9Y5W3 355 aaPredicted RBP10.87□□□□□ -0.67
LIMK1-201ENST00000336180 BSNQ9UPA5 3926 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 TRAV39A0A0B4J263 110 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 hCG_38984A0A1B0GV85 526 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 F5H5P2 479 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 MFNGO00587 321 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 DNPH1O43598 174 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 PRAF2O60831 178 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms