RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 Q96M66 194 aa12.9□□□□□ -0.34
UBA1-201ENST00000335972 METTL9Q9H1A3 318 aa12.9□□□□□ -0.34
UBA1-201ENST00000335972 ANAPC10Q9UM13 185 aa12.9□□□□□ -0.34
UBA1-201ENST00000335972 ZNF705EA8MWA4 302 aaPredicted RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 ATP6V1G2-DDX39BF2Z307 99 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 SNAPC5O75971 98 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 DIRAS3O95661 229 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 NRASP01111 189 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 NR2C1P13056 603 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 RBMXP38159 391 aaKnown RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 RBM39Q14498 530 aaKnown RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 ZNF169Q14929 603 aaPredicted RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 PLCXD3Q63HM9 321 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 OR52H1Q8NGJ2 320 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 GUCD1Q96NT3 240 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 NMES1Q9C002 83 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 WNT5BQ9H1J7 359 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 XRCC2O43543 280 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 DUSP1P28562 367 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 NPBWR2P48146 333 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 HIST1H3AP68431 136 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 RAB35Q15286 201 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 AKIRIN2Q53H80 203 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 ACTBL2Q562R1 376 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 DCAF12Q5T6F0 453 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 HIST2H3PS2Q5TEC6 136 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 TFAP2EQ6VUC0 442 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 HIST2H3AQ71DI3 136 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 PEG10Q86TG7 708 aaKnown RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 CALHM2Q9HA72 323 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 TRIM77I1YAP6 450 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 ABCD4O14678 606 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 HLA-HP01893 362 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 TPT1P13693 172 aaKnown RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 ASCL1P50553 236 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 CALHM1Q8IU99 346 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 MARC2Q969Z3 335 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
UBA1-201ENST00000335972 NUDT16L1Q9BRJ7 211 aaKnown RBP12.89□□□□□ -0.35
UBA1-201ENST00000335972 SRD5A2P31213 254 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 PABPC1L2AQ5JQF8 200 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 SLC22A25Q6T423 547 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 CPEB3Q8NE35 698 aaKnown RBP12.88□□□□□ -0.35
UBA1-201ENST00000335972 OR2V1Q8NHB1 315 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 RAB18Q9NP72 206 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 MAP1BP46821 2468 aaKnown RBP12.88□□□□□ -0.35
UBA1-201ENST00000335972 LRP3O75074 770 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 CER1O95813 267 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 IFNA2P01563 188 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 TDGF1P13385 188 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 FKBP2P26885 142 aaKnown RBP12.88□□□□□ -0.35
UBA1-201ENST00000335972 PIGPP57054 158 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 POC1AQ8NBT0 407 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 OR10AD1Q8NGE0 317 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 C2orf50Q96LR7 162 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 SIGLEC12Q96PQ1 595 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 ANXA10Q9UJ72 324 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 ST3GAL6Q9Y274 331 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 PCSK5Q92824 1860 aa12.88□□□□□ -0.35
UBA1-201ENST00000335972 SERPINE3A8MV23 424 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
UBA1-201ENST00000335972 ADCYAP1P18509 176 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 CBX5P45973 191 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 CYB561P49447 251 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 RBP2P50120 134 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
UBA1-201ENST00000335972 ZXDAP98168 799 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 TSNAXQ99598 290 aaKnown RBP12.87□□□□□ -0.35
UBA1-201ENST00000335972 PAPOLGQ9BWT3 736 aaKnown RBP12.87□□□□□ -0.35
UBA1-201ENST00000335972 OR2H1Q9GZK4 316 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 GPR35Q9HC97 309 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 IL36RNQ9UBH0 155 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 PRR14LQ5THK1 2151 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 A0A1B0GV50 99 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 PRSS54Q6PEW0 395 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 FOXL2NBQ6ZUU3 175 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 SLC25A26Q70HW3 274 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 UBALD2Q8IYN6 164 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 OR5T2Q8NGG2 359 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 ZFHX4Q86UP3 3567 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 TTC28Q96AY4 2481 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 IGHV3-64DA0A0J9YX35 117 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 DNASE2O00115 360 aaPredicted RBP12.87□□□□□ -0.35
UBA1-201ENST00000335972 EDN3P14138 238 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 FCGR2CP31995 323 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 FAM3AP98173 230 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 SPEM2Q0P670 501 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 C1orf210Q8IVY1 113 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 SGCZQ96LD1 299 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 ARRDC1-AS1Q9H2J1 176 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 LAMA5O15230 3695 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 KIAA1549Q9HCM3 1950 aa12.87□□□□□ -0.35
UBA1-201ENST00000335972 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms