RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OR10P1Q8NGE3 313 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 FRRS1LQ9P0K9 344 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 SEMG1P04279 462 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 DHODHQ02127 395 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 FOXB2Q5VYV0 432 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 LRRTM1Q86UE6 522 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 POC1BQ8TC44 478 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 PRSS27Q9BQR3 290 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 CHRNA10Q9GZZ6 450 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 SLC7A10Q9NS82 523 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 AQP7O14520 342 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 ZNF205O95201 554 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 KRASP01116 189 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 GIPP09681 153 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-201ENST00000334490 IL11P20809 199 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 PSMB6P28072 239 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 FUT5Q11128 374 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 MOGAT3Q86VF5 341 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 RNF133Q8WVZ7 376 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 PRR19A6NJB7 356 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 TMPRSS2O15393 492 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 DXOO77932 396 aaKnown RBP13.22□□□□□ -0.29
C9orf47-201ENST00000334490 CALCRP30988 508 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 RAB5BP61020 215 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 AKIRIN1Q9H9L7 192 aaPredicted RBP13.22□□□□□ -0.29
C9orf47-201ENST00000334490 PSG11Q9UQ72 335 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 F6UZH7 168 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 PTP4A3O75365 173 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 SNRNP70P08621 437 aaKnown RBP13.22□□□□□ -0.29
C9orf47-201ENST00000334490 FOXO1Q12778 655 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 LINC00303Q3SY05 128 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 C19orf48Q6RUI8 117 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 OR2G3Q8NGZ4 309 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 PRR33A8MZF0 331 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 TLE1Q04724 770 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 NHLRC1Q6VVB1 395 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 MRGPRDQ8TDS7 321 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 CTHRC1Q96CG8 243 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 CMTM3Q96MX0 182 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 GAL3ST2Q9H3Q3 398 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 MSL2Q9HCI7 577 aa13.22□□□□□ -0.29
C9orf47-201ENST00000334490 ST8SIA5O15466 376 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 SLC38A6Q8IZM9 456 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 PIK3IP1Q96FE7 263 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 STRAPQ9Y3F4 350 aaKnown RBP13.21□□□□□ -0.29
C9orf47-201ENST00000334490 ASAH2BP0C7U1 165 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 VMA21Q3ZAQ7 101 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 LYG2Q86SG7 212 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.29
C9orf47-201ENST00000334490 SLIRPQ9GZT3 109 aaKnown RBP13.21□□□□□ -0.29
C9orf47-201ENST00000334490 OPN3Q9H1Y3 402 aaPredicted RBP13.21□□□□□ -0.29
C9orf47-201ENST00000334490 SBF1O95248 1867 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 OTOFQ9HC10 1997 aa13.21□□□□□ -0.29
C9orf47-201ENST00000334490 IGHV3-43A0A0B4J1X8 118 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 OR4C45A6NMZ5 311 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 OGG1O15527 345 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 PNPP00491 289 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 IGHV3-43DP0DP04 118 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 OR3A1P47881 315 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 OXA1LQ15070 435 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 P2RY6Q15077 328 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 ZNF239Q16600 458 aaKnown RBP13.21□□□□□ -0.3
C9orf47-201ENST00000334490 CIB3Q96Q77 187 aaPredicted RBP13.21□□□□□ -0.3
C9orf47-201ENST00000334490 PRELID1Q9Y255 219 aa13.21□□□□□ -0.3
C9orf47-201ENST00000334490 CTAG2O75638 210 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ZP4Q12836 540 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ZNF770Q6IQ21 691 aaPredicted RBP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 FDCSPQ8NFU4 85 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 SFT2D1Q8WV19 159 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ZNF236Q9UL36 1845 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 COL6A6A6NMZ7 2263 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 LCTP09848 1927 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 OR5H14A6NHG9 310 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 IGHV3-13P01766 116 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 IGHV3-7P01780 117 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 OR5G3P0C626 314 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 KCNJ3P48549 501 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 SP6Q3SY56 376 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 PLA1AQ53H76 456 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 TMEM128Q5BJH2 165 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 C17orf107Q6ZR85 190 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ZPLD1Q8TCW7 415 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 A0A0A6YYJ9 748 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ZIC2O95409 532 aaPredicted RBP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 IGHA1P01876 353 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 HOXA6P31267 233 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 SRP14P37108 136 aaKnown RBP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 MDH2P40926 338 aaKnown RBP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ID4P47928 161 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 FAM27BQ5VT28 67 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 CCDC190Q86UF4 302 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 ZFP62Q8NB50 900 aaPredicted RBP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 TAF9BQ9HBM6 251 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 OR6C3Q9NZP0 311 aa13.2□□□□□ -0.3
C9orf47-201ENST00000334490 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
C9orf47-201ENST00000334490 CACNA1BQ00975 2339 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms