RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ABCA4P78363 2273 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 F8W1H4 67 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CTNSO60931 367 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 HPXP02790 462 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 PGA3P0DJD8 388 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 COX5BP10606 129 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ASTLQ6HA08 431 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ADAMTS18Q8TE60 1221 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 VN1R3Q9BXE9 311 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TUBA4BQ9H853 241 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CD84Q9UIB8 345 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 B4DXG7 233 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ARG1P05089 322 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 EFNA3P52797 238 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 HERPUD1Q15011 391 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MLF2Q15773 248 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC25A52Q3SY17 297 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TAS1R1Q7RTX1 841 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 DNAJC5GQ8N7S2 189 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC25A44Q96H78 314 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM134Q9H6X4 195 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 FOXH1O75593 365 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 NEURL1O76050 574 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CLDN7O95471 211 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 C1RP00736 705 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CLCN3P51790 818 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC10A6Q3KNW5 377 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM201Q5SNT2 666 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SPTSSAQ969W0 71 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM125Q96AQ2 219 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CGGBP1Q9UFW8 167 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 FAM208AQ9UK61 1670 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 TRDV1A0A1B0GX56 115 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 UPK1AO00322 258 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 TACR2P21452 398 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 DRD3P35462 400 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 PIGFQ07326 219 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 IL10RAQ13651 578 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 CEACAM21Q3KPI0 293 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 WBP2NLQ6ICG8 309 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 ALOXE3Q9BYJ1 711 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 NDRG4Q9ULP0 352 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 DDTLA6NHG4 134 aaPredicted RBP5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 C4orf47A7E2U8 309 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 KIR2DS3K7RE56 304 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 NDUFB3O43676 98 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 C1QTNF9P0C862 333 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 KIR2DS3Q14952 304 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 C1orf122Q6ZSJ8 110 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 RTN4RL1Q86UN2 441 aaPredicted RBP5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 ADAT1Q9BUB4 502 aaKnown RBP5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 SFXN1Q9H9B4 322 aa5.46□□□□□ -1.53
CDC42BPA-201ENST00000334218 COL1A1P02452 1464 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 KIAA1549Q9HCM3 1950 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 USP2O75604 605 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 DUS4LO95620 317 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 FURINP09958 794 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 HINT1P49773 126 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 GSK3BP49841 420 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 SERINC5Q86VE9 423 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 FER1L6-AS2Q96M78 137 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 GABARAPL3Q9BY60 117 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 G6PC2Q9NQR9 355 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 EML5Q05BV3 1969 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 hADV38S2A0JD32 116 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 APCSP02743 223 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 TNFRSF1BP20333 461 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 RPL12P30050 165 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 SUMO2P61956 95 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 AWAT1Q58HT5 328 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC16A12Q6ZSM3 486 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR10G9Q8NGN4 311 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 IGSF21Q96ID5 467 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 ABHD14AQ9BUJ0 271 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 UFC1Q9Y3C8 167 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 AUP1Q9Y679 476 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 NRCAMQ92823 1304 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 IRF2P14316 349 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 RPS4Y1P22090 263 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 DCAF7P61962 342 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 WIPI1Q5MNZ9 446 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 DUX4L9Q6RFH8 374 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR9G4Q8NGQ1 327 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC35B2Q8TB61 432 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 IL1F10Q8WWZ1 152 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 PARP4Q9UKK3 1724 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 TRAV18A0A075B6X5 111 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 KNCNA6PVL3 124 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 GEMIN2O14893 280 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 MLNRO43193 412 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 MEIG1Q5JSS6 88 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 MOB3BQ86TA1 216 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 PTH2Q96A98 100 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 PTX4Q96A99 478 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 MSL2Q9HCI7 577 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 NCOR1O75376 2440 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 IGSF23A1L1A6 192 aa5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 ALDOAP04075 364 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-201ENST00000334218 GSTP1P09211 210 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms