RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SLAMF9Q96A28 289 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 C12orf43Q96C57 262 aaKnown RBP13.42□□□□□ -0.26
LRRC28-202ENST00000331450 CEP19Q96LK0 163 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 GFI1Q99684 422 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 NARFLQ9H6Q4 476 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 SNTG1Q9NSN8 517 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 TXNL4BQ9NX01 149 aaKnown RBP13.42□□□□□ -0.26
LRRC28-202ENST00000331450 RASL12Q9NYN1 266 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 CELSR1Q9NYQ6 3014 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 VPS13CQ709C8 3753 aa13.42□□□□□ -0.26
LRRC28-202ENST00000331450 MAP1AP78559 2803 aaPredicted RBP13.41□□□□□ -0.26
LRRC28-202ENST00000331450 IGHV3OR15-7A0A075B7D8 119 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 TRAV38-1A0A0B4J264 116 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 MEGF11A6BM72 1044 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 CEACAM18A8MTB9 384 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 ANGPTL7O43827 346 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 KDM4BO94953 1096 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 IL2RGP31785 369 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 OR3A4PP47883 348 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 NPBWR2P48146 333 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 C22orf42Q6IC83 251 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 C1QL2Q7Z5L3 287 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 SATL1Q86VE3 508 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 Q8IYB0 196 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 SPICQ8N5J4 248 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 MAPK1IP1LQ8NDC0 245 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 OR51F2Q8NH61 342 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 TMIGD2Q96BF3 282 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 GPER1Q99527 375 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 GAL3ST1Q99999 423 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 SLITRK2Q9H156 845 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 SMURF1Q9HCE7 757 aa13.41□□□□□ -0.26
LRRC28-202ENST00000331450 FLNAP21333 2647 aaKnown RBP13.4□□□□□ -0.26
LRRC28-202ENST00000331450 CYB5AP00167 134 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 AMY2BP19961 511 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 BCL3P20749 454 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 PTGFRP43088 359 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 GMFBP60983 142 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 MICBQ29980 383 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 SMIM21Q3B7S5 101 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 C1orf100Q5SVJ3 147 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 LYPD2Q6UXB3 125 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 BATF2Q8N1L9 274 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 DEFB108BQ8NET1 73 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 Q8NFD4 153 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 TNFAIP8L1Q8WVP5 186 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 C1orf159Q96HA4 380 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 C1orf147Q96MC9 270 aaPredicted RBP13.4□□□□□ -0.26
LRRC28-202ENST00000331450 CHCHD6Q9BRQ6 235 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 UQCC2Q9BRT2 126 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 ZNF665Q9H7R5 613 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 CNTD2Q9H8S5 307 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 PATZ1Q9HBE1 687 aaKnown RBP13.4□□□□□ -0.26
LRRC28-202ENST00000331450 RHOFQ9HBH0 211 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 EXOSC4Q9NPD3 245 aaKnown RBP13.4□□□□□ -0.26
LRRC28-202ENST00000331450 RBFOX1Q9NWB1 397 aaKnown RBP13.4□□□□□ -0.26
LRRC28-202ENST00000331450 NLKQ9UBE8 527 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 ZNF222Q9UK12 451 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 SSR3Q9UNL2 185 aa13.4□□□□□ -0.26
LRRC28-202ENST00000331450 IGKV1D-17A0A075B6S4 117 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 OR2AT4A6NND4 320 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 TRAPPC2LH3BP13 241 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 NDUFA2O43678 99 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 NXPH2O95156 264 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 SFTPBP07988 381 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 TMEM225BP0DP42 221 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 KCNJ8Q15842 424 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 TIMM50Q3ZCQ8 353 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 ATPAF1Q5TC12 328 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-202ENST00000331450 GDPGP1Q6ZNW5 385 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 JAGN1Q8N5M9 183 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 PNLDC1Q8NA58 520 aaKnown RBP13.39□□□□□ -0.27
LRRC28-202ENST00000331450 OR4D6Q8NGJ1 314 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 ANGPTL6Q8NI99 470 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 RAB39BQ96DA2 213 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 C18orf12Q96KH6 178 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 CENPOQ9BU64 300 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 FUNDC2Q9BWH2 189 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 DNTTIP1Q9H147 329 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 IL36GQ9NZH8 169 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 KAAG1Q9UBP8 84 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 CTSZQ9UBR2 303 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
LRRC28-202ENST00000331450 MAST4O15021 2626 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 KNG1P01042 644 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 GYPAP02724 150 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 WNT2P09544 360 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 PSG2P11465 335 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 RPS2P15880 293 aaKnown RBP13.38□□□□□ -0.27
LRRC28-202ENST00000331450 CPT2P23786 658 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 MYL9P24844 172 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 CFPP27918 469 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 KRTAP1-1Q07627 177 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 ELP2Q6IA86 826 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 FAM166AQ6J272 317 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 ZNF788Q6ZQV5 615 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms