RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 IGHV4-34P06331 123 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 GNG3P63215 75 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 EIF3IQ13347 325 aaKnown RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 C1QTNF12Q5T7M4 302 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 XAF1Q6GPH4 301 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 WDR74Q6RFH5 385 aaPredicted RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 BTNL3Q6UXE8 466 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 C15orf54Q8N8G6 183 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 FFAR1O14842 300 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 PTBP1P26599 531 aaKnown RBP eCLIP9.04□□□□□ -0.964e-13■■■■□ 25.1
CHD3-201ENST00000330494 SNRPEP62304 92 aaKnown RBP9.04□□□□□ -0.96
CHD3-201ENST00000330494 PRR27Q6MZM9 219 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 SIGLECL1Q8N7X8 197 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 GPX8Q8TED1 209 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 SLC26A1Q9H2B4 701 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 PARD6AQ9NPB6 346 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 DLL4Q9NR61 685 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 CLCF1Q9UBD9 225 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 TNS1Q9HBL0 1735 aaKnown RBP9.04□□□□□ -0.96
CHD3-201ENST00000330494 OR2M5A3KFT3 312 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 CLEC18AA5D8T8 446 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 PTGFRP43088 359 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 UBE2G1P62253 170 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 SSX1Q16384 188 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 DRAM2Q6UX65 266 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 CLEC18CQ8NCF0 446 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 STRAPQ9Y3F4 350 aaKnown RBP9.04□□□□□ -0.96
CHD3-201ENST00000330494 LRRC37AA6NMS7 1700 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 CENPVL1A0A0U1RR11 272 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 SLC31A2O15432 143 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 SLC25A1P53007 311 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 SIGLEC14Q08ET2 396 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 LYG1Q8N1E2 194 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 C4orf45Q96LM5 186 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 A0A1B0GTQ1 180 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 NGFP01138 241 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 ZNF141Q15928 474 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 MICBQ29980 383 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 COMMD1Q8N668 190 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 PTPMT1Q8WUK0 201 aaPredicted RBP9.04□□□□□ -0.96
CHD3-201ENST00000330494 SLC39A7Q92504 469 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 HLXQ14774 488 aaPredicted RBP9.04□□□□□ -0.96
CHD3-201ENST00000330494 C17orf78Q8N4C9 275 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 OR8B12Q8NGG6 310 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 TMEM230Q96A57 120 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 FAM122AQ96E09 287 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 MISP3Q96FF7 219 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 BTF3L4Q96K17 158 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 SOX7Q9BT81 388 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 RPUSD3Q6P087 351 aaKnown RBP9.04□□□□□ -0.96
CHD3-201ENST00000330494 TM4SF19Q96DZ7 209 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 TAAR6Q96RI8 345 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 AKIP1Q9NQ31 210 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 ERRFI1Q9UJM3 462 aaPredicted RBP9.04□□□□□ -0.96
CHD3-201ENST00000330494 PSG11Q9UQ72 335 aa9.04□□□□□ -0.96
CHD3-201ENST00000330494 ARID1AO14497 2285 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 DHRS3O75911 302 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 PDGFBP01127 241 aaPredicted RBP9.03□□□□□ -0.96
CHD3-201ENST00000330494 TNFAIP6P98066 277 aaPredicted RBP9.03□□□□□ -0.96
CHD3-201ENST00000330494 ACOT7LQ6ZUV0 252 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 OR10D4PQ8NGN7 298 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 UBTD1Q9HAC8 227 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 BARX1Q9HBU1 254 aaPredicted RBP9.03□□□□□ -0.96
CHD3-201ENST00000330494 TMEM30CPA0ZSE6 113 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 SERTM1A2A2V5 107 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 FCGR3BO75015 233 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 KRTDAPP60985 99 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 MESTQ5EB52 335 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 OR2Y1Q8NGV0 311 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 VSTM2LQ96N03 204 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 TMPRSS5Q9H3S3 457 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 KCNIP2Q9NS61 270 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 PSME4Q14997 1843 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 CYR61O00622 381 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 CALCRP30988 508 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 SLC37A1P57057 533 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 SNTB1Q13884 538 aaKnown RBP9.03□□□□□ -0.96
CHD3-201ENST00000330494 DGAT2L6Q6ZPD8 337 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
CHD3-201ENST00000330494 HSPB2A8KAH6 182 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 CTRB1P17538 263 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 ZP3P21754 424 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 SRD5A2P31213 254 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 MMP15P51511 669 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 HSPB2Q16082 182 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 HIKESHIQ53FT3 197 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 CTRB2Q6GPI1 263 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 TSEN54Q7Z6J9 526 aaKnown RBP9.03□□□□□ -0.96
CHD3-201ENST00000330494 TMEM229BQ8NBD8 167 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 MRGPRDQ8TDS7 321 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 LRRC29Q8WV35 223 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 TMEM18Q96B42 140 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 ANK1P16157 1881 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 FUT3P21217 361 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 SLC38A6Q8IZM9 456 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 SLC24A4Q8NFF2 622 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 M1APQ8TC57 530 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 PP6455Q8WZ26 134 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 ZNF835Q9Y2P0 537 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms