RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LAMTOR2Q9Y2Q5 125 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 MEMO1Q9Y316 297 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 HCFC2Q9Y5Z7 792 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 HEATR5BQ9P2D3 2071 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 A0A1W2PPV9 198 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 FAM221AA4D161 298 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 CDC14CA4D256 554 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 DBIP07108 87 aaKnown RBP10.44□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM225BP0DP42 221 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 PSG1P11464 419 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 PMPCAQ10713 525 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF77Q15935 545 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 CATSPERDQ86XM0 798 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 C9orf40Q8IXQ3 194 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 APH1AQ96BI3 265 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
SHMT2-201ENST00000328923 SLCO5A1Q9H2Y9 848 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM242Q9NWH2 141 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 P4HTMQ9NXG6 502 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 TTC28Q96AY4 2481 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 C5orf67F2Z3F1 127 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 CYR61O00622 381 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 SFT2D2O95562 160 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 JMJD7P0C870 316 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 ZFP36L1Q07352 338 aaKnown RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 FZD2Q14332 565 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 PCK2Q16822 640 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM176BQ3YBM2 270 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM128Q5BJH2 165 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 LY6G5CQ5SRR4 150 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 PLXDC2Q6UX71 529 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 TRAPPC6BQ86SZ2 158 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 OR52E2Q8NGJ4 325 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 GPR146Q96CH1 333 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 MRPS28Q9Y2Q9 187 aaKnown RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 TCF20Q9UGU0 1960 aaKnown RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 TRAV34A0A0B4J273 112 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 TRBV5-5A0A0J9YX44 114 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 SERTM2A0A1B0GWG4 89 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 HNRNPA1P09651 372 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 CDKN1AP38936 164 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 HINT1P49773 126 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 CLDN18P56856 261 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 VAMP3Q15836 100 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF684Q5T5D7 378 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 LCN10Q6JVE6 187 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 ABHD17CQ6PCB6 329 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 OR4K13Q8NH42 304 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 VN1R17PQ8TDU5 208 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 PRRX2Q99811 253 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 MKKSQ9NPJ1 570 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 SLC2A9Q9NRM0 540 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 FLRT3Q9NZU0 649 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 FRRS1LQ9P0K9 344 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF107Q9UII5 783 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 LSM5Q9Y4Y9 91 aaKnown RBP10.43□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF780BQ9Y6R6 833 aa10.43□□□□□ -0.74
SHMT2-201ENST00000328923 BORCS7-ASMTA0A0B4J1R7 106 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 PSMB5P28074 263 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 TAS2R31P59538 309 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 SUPT4H1P63272 117 aaKnown RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM215Q68D42 235 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 FBXW12Q6X9E4 464 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 Q6ZWC4 215 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 SELENOHQ8IZQ5 122 aaKnown RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 IL22RA1Q8N6P7 574 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 PLPP7Q8NBV4 271 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 SLC16A11Q8NCK7 471 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 CDX2Q99626 313 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 COL25A1Q9BXS0 654 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 C5orf66Q9H5L9 145 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 ELL3Q9HB65 397 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 C14orf166Q9Y224 244 aaKnown RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 WNT6Q9Y6F9 365 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 LRRK1Q38SD2 2015 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 SPEGQ15772 3267 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 DNAJB6O75190 326 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 HSPB1P04792 205 aaKnown RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 C8orf89P0DMQ9 161 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 P2RY1P47900 373 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 CLDN2P57739 230 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 BTN3A2P78410 334 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 FHL1Q13642 323 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 PRR27Q6MZM9 219 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 NKD1Q969G9 470 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 ALG12Q9BV10 488 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF703Q9H7S9 590 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM106BQ9NUM4 274 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 IKZF2Q9UKS7 526 aa10.42□□□□□ -0.74
SHMT2-201ENST00000328923 TRBV5-7A0A0A0MS05 114 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ERI3O43414 337 aaKnown RBP10.41□□□□□ -0.74
SHMT2-201ENST00000328923 WDR1O75083 606 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 DEDDO75618 318 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 GPR1P46091 355 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 DPTQ07507 201 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 HYAL1Q12794 435 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 ELOA3BQ3SY89 546 aa10.41□□□□□ -0.74
SHMT2-201ENST00000328923 MORN2Q502X0 79 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms