RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TGOLN2O43493 480 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 AHSA1O95433 338 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF43P17038 809 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 CSNK1A1P48729 337 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 HLA-DRB3P79483 266 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 DMRTC1Q5HYR2 192 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 FBXW12Q6X9E4 464 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 ABHD12BQ7Z5M8 362 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-201ENST00000327554 COMMD2Q86X83 199 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 TMEM183AQ8IXX5 376 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 LRTM2Q8N967 370 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 PLPP5Q8NEB5 264 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 OR8B12Q8NGG6 310 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 PTPMT1Q8WUK0 201 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-201ENST00000327554 ATG101Q9BSB4 218 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 UNC80Q8N2C7 3258 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 FRG2CA6NGY1 282 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 B4DEV8 164 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 NPIPA5E9PKD4 350 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 GEMIN2O14893 280 aaKnown RBP11.18□□□□□ -0.62
CCDC60-201ENST00000327554 DBHP09172 617 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 FUT3P21217 361 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 GJA4P35212 333 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 FOXF1Q12946 379 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF776Q68DI1 518 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-201ENST00000327554 ABLIM2Q6H8Q1 611 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 FBXL14Q8N1E6 418 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 OR5D18Q8NGL1 313 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 CDCA3Q99618 268 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF700Q9H0M5 742 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 CDH20Q9HBT6 801 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 GPR84Q9NQS5 396 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 MED29Q9NX70 200 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 NPIPA1Q9UND3 350 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 H0YIG0 161 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 DUSP1P28562 367 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 HSD17B7P56937 341 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 TSPO2Q5TGU0 170 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 METTL27Q8N6F8 245 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-201ENST00000327554 CLDND2Q8NHS1 167 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 ADIPOR1Q96A54 375 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 FAM131CQ96AQ9 280 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 FAM71F1Q96KD3 344 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-201ENST00000327554 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-201ENST00000327554 GPR87Q9BY21 358 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 VN1R1Q9GZP7 353 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 OR14J1Q9UGF5 321 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 CYP8B1Q9UNU6 501 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 MTCH2Q9Y6C9 303 aa11.18□□□□□ -0.62
CCDC60-201ENST00000327554 CDC14CA4D256 554 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 CYTIPO60759 359 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 CA11O75493 328 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 PNLIPP16233 465 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 GALNSP34059 522 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF248Q8NDW4 579 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 GPR119Q8TDV5 335 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 SLC46A1Q96NT5 459 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 METTL9Q9H1A3 318 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 MOB1AQ9H8S9 216 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 TMEM242Q9NWH2 141 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 TRBV24-1A0A075B6N3 115 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 IGSF23A1L1A6 192 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 FAM221BA6H8Z2 402 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 FAM24AA6NFZ4 105 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 ALG1L2C9J202 215 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 G0S2P27469 103 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 SFTPDP35247 375 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 ALDH3B1P43353 468 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 DAP3P51398 398 aaKnown RBP11.17□□□□□ -0.62
CCDC60-201ENST00000327554 ZP4Q12836 540 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF266Q14584 549 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 SLC10A1Q14973 349 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 CDCP2Q5VXM1 449 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 C6orf201Q7Z4U5 140 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 C9orf40Q8IXQ3 194 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 OR5L2Q8NGL0 311 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 OR14L1PQ8NHC6 308 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 TMEM171Q8WVE6 324 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 RTN4IP1Q8WWV3 396 aaPredicted RBP11.17□□□□□ -0.62
CCDC60-201ENST00000327554 TOMM40LQ969M1 308 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 MSI2Q96DH6 328 aaKnown RBP11.17□□□□□ -0.62
CCDC60-201ENST00000327554 TM2D1Q9BX74 207 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 OR8D2Q9GZM6 311 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 LHFPL6Q9Y693 200 aa11.17□□□□□ -0.62
CCDC60-201ENST00000327554 FAM230AA0A1W2PPH8 454 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 A0A1W2PQD3 144 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 PITX3O75364 302 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 GLI4P10075 376 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-201ENST00000327554 CCL1P22362 96 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF121P58317 390 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-201ENST00000327554 KISS1Q15726 138 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 GRINAQ7Z429 371 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 SPRED2Q7Z698 418 aa11.16□□□□□ -0.62
CCDC60-201ENST00000327554 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms