RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 FAM219AQ8IW50 185 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 ADAT1Q9BUB4 502 aaKnown RBP13.01□□□□□ -0.33
TCOF1-201ENST00000323668 GPR132Q9UNW8 380 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 WDR1O75083 606 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 CD74P04233 296 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 CRYBA1P05813 215 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 GCH1P30793 250 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 PDLIM3Q53GG5 364 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-201ENST00000323668 CST9LP1Q5W188 147 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF774Q6NX45 483 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 KCNIP4Q6PIL6 250 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 IFI44Q8TCB0 444 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 RIMS4Q9H426 269 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-201ENST00000323668 HEXA-AS1Q9H8Q6 139 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 TP53TG5Q9Y2B4 290 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 A0A096LPE4 126 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 A0A1W2PPZ6 126 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 PDCD6O75340 191 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 PSMB3P49720 205 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 ELLP55199 621 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-201ENST00000323668 TECTBQ96PL2 329 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 SSX3Q99909 188 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 RNF150Q9ULK6 438 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 ARHGEF17Q96PE2 2063 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-201ENST00000323668 A8MXK9 166 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 RRADP55042 308 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 CLDN15P56746 228 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 OR2C3Q8N628 320 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 RASL10BQ96S79 203 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 KCNK17Q96T54 332 aa13.01□□□□□ -0.33
TCOF1-201ENST00000323668 RSPO3Q9BXY4 272 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-201ENST00000323668 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF98A6NK75 572 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 CD8AP01732 235 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF32P17041 273 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 FABP9Q0Z7S8 132 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 FGF11Q92914 225 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 A0A1W2PP11 408 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 H3BMH7 237 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 H3BP45 60 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 TGFBR3LH3BV60 316 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 SERPINA7P05543 415 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 PGA3P0DJD8 388 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 BAXQ07812 192 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 SPANXN5Q5MJ07 72 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 GUSBP11Q6P575 273 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 MRPL24Q96A35 216 aaKnown RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF727A8MUV8 499 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 MT-CO2P00403 227 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 F12P00748 615 aaPredicted RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 HOXA1P49639 335 aaPredicted RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 PDZD11Q5EBL8 140 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 LINC00696Q6ZRV3 163 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 ZDHHC23Q8IYP9 409 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 HLA-CQ95604 372 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF705FA8MVS1 300 aaPredicted RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF705DP0CH99 300 aaPredicted RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF705BP0CI00 300 aaPredicted RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 NFYBP25208 207 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 ARF1P84077 181 aaKnown RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 SMAD4Q13485 552 aaKnown RBP13□□□□□ -0.33
TCOF1-201ENST00000323668 OR2V1Q8NHB1 315 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 NRIP2Q9BQI9 281 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 RTTNQ86VV8 2226 aa13□□□□□ -0.33
TCOF1-201ENST00000323668 MED19A0JLT2 244 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-201ENST00000323668 RAC1P63000 192 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 CLEC9AQ6UXN8 241 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF573Q86YE8 665 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 PLEKHA3Q9HB20 300 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 MYOZ1Q9NP98 299 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-201ENST00000323668 FAM24AA6NFZ4 105 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 ONECUT2O95948 504 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 CLN3Q13286 438 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 TSPO2Q5TGU0 170 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 MRPL41Q8IXM3 137 aaKnown RBP12.99□□□□□ -0.33
TCOF1-201ENST00000323668 LHX4Q969G2 390 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 TVP23CQ96ET8 276 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 G6PC2Q9NQR9 355 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 SLC2A8Q9NY64 477 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 GAB2Q9UQC2 676 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 MMP24Q9Y5R2 645 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 KCNMB2Q9Y691 235 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 C17orf112F2Z3M2 114 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 MS4A18H0YCH9 400 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 MFNGO00587 321 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 HLA-HP01893 362 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 FOXL2P58012 376 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 ARG2P78540 354 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 MS4A18Q3C1V0 323 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 TRIM61Q5EBN2 209 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 LRRC75AQ8NAA5 344 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 C10orf35Q96D05 121 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 WDR13Q9H1Z4 485 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 OR5AC2Q9NZP5 309 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 WSB1Q9Y6I7 421 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 AWAT1Q58HT5 328 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 ZNF787Q6DD87 383 aa12.99□□□□□ -0.33
TCOF1-201ENST00000323668 SLC26A1Q9H2B4 701 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms