RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 POM121Q96HA1 1249 aa11.49□□□□□ -0.57
PRPF18-201ENST00000320054 CEP19Q96LK0 163 aa11.49□□□□□ -0.57
PRPF18-201ENST00000320054 NRIP2Q9BQI9 281 aa11.49□□□□□ -0.57
PRPF18-201ENST00000320054 UFSP2Q9NUQ7 469 aa11.49□□□□□ -0.57
PRPF18-201ENST00000320054 MTCH1Q9NZJ7 389 aa11.49□□□□□ -0.57
PRPF18-201ENST00000320054 IGHV3-64DA0A0J9YX35 117 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 TMEM272A0A1B0GTI8 110 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 RHBDL1O75783 438 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 PMELP40967 661 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 ERVK11-1P61568 191 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 MRPS11P82912 194 aaKnown RBP11.48□□□□□ -0.57
PRPF18-201ENST00000320054 FAM189A2Q15884 450 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 LINC00299Q6ZSB3 139 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 ZNF826PQ6ZT77 177 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 OR5H6Q8NGV6 325 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 ELL3Q9HB65 397 aaPredicted RBP11.48□□□□□ -0.57
PRPF18-201ENST00000320054 RASL12Q9NYN1 266 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 COMMD3Q9UBI1 195 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 RAB22AQ9UL26 194 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 PPP1R3CQ9UQK1 317 aa11.48□□□□□ -0.57
PRPF18-201ENST00000320054 ANKRD17O75179 2603 aaKnown RBP11.48□□□□□ -0.57
PRPF18-201ENST00000320054 IGHV1-69-2A0A0G2JMI3 117 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 LRRC30A6NM36 301 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 SRRM5B3KS81 715 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 HTR3BO95264 441 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 LHBP01229 141 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 APOA1P02647 267 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 HPXP02790 462 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 CSTBP04080 98 aaKnown RBP11.47□□□□□ -0.57
PRPF18-201ENST00000320054 SFTPBP07988 381 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 BCL3P20749 454 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 NPBWR2P48146 333 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 ART1P52961 327 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 FGF12P61328 243 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 UNC119Q13432 240 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 SLC22A6Q4U2R8 563 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 NHLRC3Q5JS37 347 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 UBE2NLQ5JXB2 153 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 SAMD12Q8N8I0 201 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 TMEM104Q8NE00 496 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 OR51T1Q8NGJ9 327 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 LRRC29Q8WV35 223 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 CCL19Q99731 98 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 C6orf62Q9GZU0 229 aaPredicted RBP11.47□□□□□ -0.57
PRPF18-201ENST00000320054 ABCG5Q9H222 651 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 CXorf56Q9H5V9 222 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 HES4Q9HCC6 221 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 PEX16Q9Y5Y5 336 aa11.47□□□□□ -0.57
PRPF18-201ENST00000320054 APCP25054 2843 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 SPG11Q96JI7 2443 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 USF3Q68DE3 2245 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 A0A1W2PP11 408 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 hCG_1807616A0A1W2PRN6 198 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 CTDSP2O14595 271 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 AKR7A2O43488 359 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 CDC14BO60729 498 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 HPGDSO60760 199 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 CRTAPO75718 401 aaPredicted RBP11.46□□□□□ -0.57
PRPF18-201ENST00000320054 GTF2F2P13984 249 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 IRF2P14316 349 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 MGMTP16455 207 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 SERPINA2P20848 420 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 RPS27AP62979 156 aaKnown RBP11.46□□□□□ -0.57
PRPF18-201ENST00000320054 ZNF787Q6DD87 383 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 OR10K2Q6IF99 312 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 FAM90A1Q86YD7 464 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 C1orf87Q8N0U7 546 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 FAM58AQ8N1B3 248 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 OSR2Q8N2R0 312 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 OR6Q1Q8NGQ2 317 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 OR10K1Q8NGX5 313 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 RAB40AQ8WXH6 277 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 RDH5Q92781 318 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 SLC25A38Q96DW6 304 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 ZNF488Q96MN9 340 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 WDFY2Q96P53 400 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 TM2D1Q9BX74 207 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 TMEM59Q9BXS4 323 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 MIXL1Q9H2W2 232 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 KCNK15Q9H427 330 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 HMG20AQ9NP66 347 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 DLL4Q9NR61 685 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 RHBDL2Q9NX52 303 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 ADAM30Q9UKF2 790 aa11.46□□□□□ -0.57
PRPF18-201ENST00000320054 FBN2P35556 2912 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A10PA6NDY2 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A18PA6NE21 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A16PA6NEW6 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A20PA6NIJ5 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A8PA6NJQ4 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A7PA6NKC0 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A22PA8MWA6 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A12PA8MX19 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A5PA8MXJ8 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 FAM90A23PA8MXZ1 464 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 F8VVB4 439 aa11.45□□□□□ -0.58
PRPF18-201ENST00000320054 F8VWA3 439 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms