RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PSG2P11465 335 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 GLRA1P23415 457 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 CXCR4P61073 352 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 TMED1Q13445 227 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 LRRC75BQ2VPJ9 315 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 Q6ZPA2 131 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 LIAT1Q6ZQX7 453 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 ZDHHC23Q8IYP9 409 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 DTX3Q8N9I9 347 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 OR4C13Q8NGP0 309 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 TRUB1Q8WWH5 349 aaKnown RBP11.56□□□□□ -0.56
RPP40-201ENST00000319533 PIGCQ92535 297 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 ZNF184Q99676 751 aaPredicted RBP11.56□□□□□ -0.56
RPP40-201ENST00000319533 TTTY10Q9BZA0 68 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 PBOV1Q9GZY1 135 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 MOB1AQ9H8S9 216 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 RAB18Q9NP72 206 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 FAM206AQ9NX38 181 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 FOXJ3Q9UPW0 622 aa11.56□□□□□ -0.56
RPP40-201ENST00000319533 NOTCH3Q9UM47 2321 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 A0A0U1RQV5 110 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 H0YAE9 185 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 RHBDL1O75783 438 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 GNG3P63215 75 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 ZIK1Q3SY52 487 aaPredicted RBP11.55□□□□□ -0.56
RPP40-201ENST00000319533 KCTD8Q6ZWB6 473 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 C11orf42Q8N5U0 333 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 KLHDC1Q8N7A1 406 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 ZNRF1Q8ND25 227 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 OR2T6Q8NHC8 308 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 PIFOQ8TCI5 191 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 RORBQ92753 470 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 ELL3Q9HB65 397 aaPredicted RBP11.55□□□□□ -0.56
RPP40-201ENST00000319533 SMPD3Q9NY59 655 aaPredicted RBP11.55□□□□□ -0.56
RPP40-201ENST00000319533 GTF2A1LQ9UNN4 478 aa11.55□□□□□ -0.56
RPP40-201ENST00000319533 SNTNA6NMZ2 147 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 PRR32B1ATL7 298 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 E9PQ18 207 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 LOC110117498-PIK3R3F6TDL0 507 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 H0YJX3 145 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 MTRF1O75570 445 aaKnown RBP11.54□□□□□ -0.56
RPP40-201ENST00000319533 KRT8P05787 483 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 OR2T7P0C7T2 308 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 MAP2K3P46734 347 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 GABRA2P47869 451 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 GPM6AP51674 278 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 LY6EQ16553 131 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 CEACAM21Q3KPI0 293 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 BCL2L15Q5TBC7 163 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 THAP5Q7Z6K1 395 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 MKXQ8IYA7 352 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 Q8N2B8 174 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 OR10H4Q8NGA5 316 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 OR5A2Q8NGI9 324 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 OR2T27Q8NH04 317 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 AQP3Q92482 292 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 PPP1R14AQ96A00 147 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 HRASLS5Q96KN8 279 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 HIST1H2AAQ96QV6 131 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 TBX5Q99593 518 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 APOL4Q9BPW4 351 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 VCXQ9H320 206 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 HEXA-AS1Q9H8Q6 139 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 C8orf4Q9NR00 106 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 C19orf12Q9NSK7 152 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 RASL12Q9NYN1 266 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 NUFIP1Q9UHK0 495 aaKnown RBP11.54□□□□□ -0.56
RPP40-201ENST00000319533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPP40-201ENST00000319533 R4GMQ9 66 aa11.54□□□□□ -0.56
RPP40-201ENST00000319533 FAM90A8PA6NJQ4 464 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 VGLL3A8MV65 326 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 ZNF732B4DXR9 585 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 ANGPTL7O43827 346 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 CHST1O43916 411 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 ATP6V1B1P15313 513 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 ADARB1P78563 741 aaKnown RBP11.53□□□□□ -0.56
RPP40-201ENST00000319533 RIPPLY1Q0D2K3 151 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 MEDAGQ5VYS4 303 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 FAM185AQ8N0U4 392 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 YIPF7Q8N8F6 280 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 TMEM185AQ8NFB2 350 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 ZNF671Q8TAW3 534 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 OR51E1Q8TCB6 317 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 WIPF2Q8TF74 440 aaPredicted RBP11.53□□□□□ -0.56
RPP40-201ENST00000319533 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 CDCA4Q9BXL8 241 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 NPFFR1Q9GZQ6 430 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 GPR84Q9NQS5 396 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 LRRC42Q9Y546 428 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 GMPPBQ9Y5P6 360 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 SNX5Q9Y5X3 404 aa11.53□□□□□ -0.56
RPP40-201ENST00000319533 A0A1W2PQL4 384 aaPredicted RBP11.52□□□□□ -0.57
RPP40-201ENST00000319533 OR5B21A6NL26 309 aa11.52□□□□□ -0.57
RPP40-201ENST00000319533 APOL3O95236 402 aa11.52□□□□□ -0.57
RPP40-201ENST00000319533 IGLV3-1P01715 115 aa11.52□□□□□ -0.57
RPP40-201ENST00000319533 GNAO1P09471 354 aa11.52□□□□□ -0.57
RPP40-201ENST00000319533 SNRPGP62308 76 aaKnown RBP11.52□□□□□ -0.57
RPP40-201ENST00000319533 MFGE8Q08431 387 aaPredicted RBP11.52□□□□□ -0.57
RPP40-201ENST00000319533 ZBTB37Q5TC79 503 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms