RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 LIME1Q9H400 295 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 PPP4R1LQ9P1A2 415 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 SHANK1Q9Y566 2161 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF850A8MQ14 1090 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 E5RGE8 158 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 ADAM10O14672 748 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 NPIPB7O75200 414 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 SNRPCP09234 159 aaKnown RBP8.47□□□□□ -1.05
PTPRA-202ENST00000318266 FCARP24071 287 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 UBE2V2Q15819 145 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 ABCA11PQ4W5N1 156 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 FAM180AQ6UWF9 173 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF283Q8N7M2 679 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 STT3BQ8TCJ2 826 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 SNX22Q96L94 193 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 PECRQ9BY49 303 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 PLEKHA2Q9HB19 425 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 PLEKHJ1Q9NW61 149 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 NSG2Q9Y328 171 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 C5orf67F2Z3F1 127 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 KLF8O95600 359 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-202ENST00000318266 ONECUT2O95948 504 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 HNRNPA2B1P22626 353 aaKnown RBP8.47□□□□□ -1.05
PTPRA-202ENST00000318266 KIR2DL1P43626 348 aaPredicted RBP8.47□□□□□ -1.05
PTPRA-202ENST00000318266 CASP6P55212 293 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 FBXW4P57775 412 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 RND3P61587 244 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 KISS1Q15726 138 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 STX12Q86Y82 276 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 C1QL4Q86Z23 238 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 C9orf40Q8IXQ3 194 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 COMMD1Q8N668 190 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 TMEM217Q8N7C4 229 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 OR2AJ1Q8NGZ0 328 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 SHDQ96IW2 340 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 SLC46A1Q96NT5 459 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 KCNK17Q96T54 332 aa8.47□□□□□ -1.05
PTPRA-202ENST00000318266 NSG1A0A0A6YYJ2 146 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 RBFOX3A6NFN3 312 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 FAM24AA6NFZ4 105 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 SEC14L6B5MCN3 397 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 TMEM150CB9EJG8 249 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 E9PLN8 166 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 TSTD3H0UI37 97 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 SLC31A2O15432 143 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 CA3P07451 260 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 TRGC1P0CF51 173 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 OR5H8P0DN80 308 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 CTSEP14091 401 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF17P17021 662 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 GRINAQ7Z429 371 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF429Q86V71 674 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 HIST3H2BBQ8N257 126 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 OR11L1Q8NGX0 322 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 FRZBQ92765 325 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 ADIPOR1Q96A54 375 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 GALNT14Q96FL9 552 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 MAGT1Q9H0U3 335 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 IGFLR1Q9H665 355 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 AK3Q9UIJ7 227 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 LHFPL6Q9Y693 200 aa8.46□□□□□ -1.05
PTPRA-202ENST00000318266 IGHV3-20A0A0C4DH32 117 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 OR5H15A6NDH6 313 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 FRG2CA6NGY1 282 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 OR5H1A6NKK0 313 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 ANGPTL7O43827 346 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 FCGR2AP12318 317 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 FAHP16930 419 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 NTSR1P30989 418 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 GFERP55789 205 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 RUNX1Q01196 453 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 TMEM176BQ3YBM2 270 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 AKR1C8PQ5T2L2 129 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 DEGS2Q6QHC5 323 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 RTN4IP1Q8WWV3 396 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 GINS3Q9BRX5 216 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 UNKLQ9H9P5 680 aaKnown RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 TUBD1Q9UJT1 453 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 KCNIP3Q9Y2W7 256 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 SLCO1B1Q9Y6L6 691 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 A0A1W2PQF6 199 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 ZNF724A8MTY0 619 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 GEMIN2O14893 280 aaKnown RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 DAP3P51398 398 aaKnown RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 TLE1Q04724 770 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 NSDHLQ15738 373 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 ZNF385CQ66K41 422 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 REC114Q7Z4M0 266 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 TGIF2LXQ8IUE1 241 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 SLC22A18ASQ8N1D0 253 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 RNASE11Q8TAA1 199 aaKnown RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 HPSE2Q8WWQ2 592 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 LURAP1Q96LR2 239 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 PACRGQ96M98 296 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 GPHA2Q96T91 129 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 CDCA3Q99618 268 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-202ENST00000318266 FAAP24Q9BTP7 215 aa8.46□□□□□ -1.06
PTPRA-202ENST00000318266 PISDQ9UG56 409 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms