RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 GSX2Q9BZM3 304 aa12.71□□□□□ -0.38
TRIM25-201ENST00000316881 SEMG1P04279 462 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-201ENST00000316881 TIAL1Q01085 375 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM25-201ENST00000316881 CDH26Q8IXH8 852 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 ORAI1Q96D31 301 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 EML2O95834 649 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 Q3ZCU0 254 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 TMEM128Q5BJH2 165 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 UBALD1Q8TB05 177 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 BCL2L2Q92843 193 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-201ENST00000316881 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-201ENST00000316881 TRIP11Q15643 1979 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 TMPRSS2O15393 492 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 AKR7A2O43488 359 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 PMP22Q01453 160 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 OR2M7Q8NG81 312 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 VSTM2AQ8TAG5 236 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 PLSCR3Q9NRY6 295 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 C20orf141Q9NUB4 165 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 RYDENQ9NUL5 291 aaKnown RBP12.7□□□□□ -0.38
TRIM25-201ENST00000316881 PCOLCE2Q9UKZ9 415 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 TTC3P53804 2025 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 AQP8O94778 261 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 SP1P08047 785 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 SPP1P10451 314 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 EXOSC2Q13868 293 aaKnown RBP12.7□□□□□ -0.38
TRIM25-201ENST00000316881 CBLN3Q6UW01 205 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 HGDQ93099 445 aa12.7□□□□□ -0.38
TRIM25-201ENST00000316881 RCL1Q9Y2P8 373 aaKnown RBP12.7□□□□□ -0.38
TRIM25-201ENST00000316881 PDCD6O75340 191 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 C3AR1Q16581 482 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 C8orf82Q6P1X6 216 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-201ENST00000316881 ASB13Q8WXK3 278 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 DERL3Q96Q80 235 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 CTDSP1Q9GZU7 261 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 AUNIPQ9H7T9 357 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 KIAA1217Q5T5P2 1943 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 KNTC1P50748 2209 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 A0A1B0GUH1 482 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 LANCL1O43813 399 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 ZFP36L2P47974 494 aaKnown RBP12.69□□□□□ -0.38
TRIM25-201ENST00000316881 TMEM267Q0VDI3 215 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-201ENST00000316881 SLC25A35Q3KQZ1 300 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 KRTCAP3Q53RY4 240 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 FAM27D1Q5T7N8 215 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 PRR27Q6MZM9 219 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 RPUSD4Q96CM3 377 aaKnown RBP12.69□□□□□ -0.38
TRIM25-201ENST00000316881 RASL11BQ9BPW5 248 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 RNF7Q9UBF6 113 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 FOXO1Q12778 655 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 PDCD1Q15116 288 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 GMPPAQ96IJ6 420 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-201ENST00000316881 PLEKHB1Q9UF11 243 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-201ENST00000316881 GP1BAP07359 652 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 PATE4P0C8F1 98 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 LPAR6P43657 344 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 OR52L2PQ8NGH6 319 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 ADGRL4Q9HBW9 690 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 AVPI1Q5T686 147 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 OR4C16Q8NGL9 310 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 TMED6Q8WW62 240 aa12.69□□□□□ -0.38
TRIM25-201ENST00000316881 A0A1W2PRD5 423 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 A0A1W2PRF3 423 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 A0A1W2PRM7 423 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 HIST1H1DP16402 221 aaKnown RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 FPR2P25090 351 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 DCTDP32321 178 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 LSM6P62312 80 aaKnown RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 RHOBP62745 196 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 CDK5Q00535 292 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 ZNF239Q16600 458 aaKnown RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 CA10Q9NS85 328 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 URGCP-MRPS24S4R325 110 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 ASCL1P50553 236 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 RPUSD3Q6P087 351 aaKnown RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 INO80CQ6PI98 192 aaPredicted RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 MRGPRDQ8TDS7 321 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 SMIM4Q8WVI0 70 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 GAR1Q9NY12 217 aaKnown RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 LIPT2A6NK58 231 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 CST2P09228 141 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 CRYBB2P43320 205 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 GZMKP49863 264 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 ZNF764Q96H86 408 aaPredicted RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 FAM157AC9JC47 383 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 PPP1R2P9O14990 202 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 DUS4LO95620 317 aaKnown RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 PGA3P0DJD8 388 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 CCL3P10147 92 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 C1orf185Q5T7R7 199 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 DGAT2L6Q6ZPD8 337 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 SPICQ8N5J4 248 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 ASB10Q8WXI3 467 aa12.68□□□□□ -0.38
TRIM25-201ENST00000316881 LSM2Q9Y333 95 aaKnown RBP12.68□□□□□ -0.38
TRIM25-201ENST00000316881 A0A1W2PQF6 199 aa12.67□□□□□ -0.38
TRIM25-201ENST00000316881 MS4A18H0YCH9 400 aa12.67□□□□□ -0.38
TRIM25-201ENST00000316881 MS4A18Q3C1V0 323 aa12.67□□□□□ -0.38
TRIM25-201ENST00000316881 OR13D1Q8NGV5 346 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms