RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ISOC2Q96AB3 205 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 INTS12Q96CB8 462 aaKnown RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ADGRG7Q96K78 797 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 FER1L6-AS2Q96M78 137 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 FANCFQ9NPI8 374 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ASCL3Q9NQ33 180 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 GLS2Q9UI32 602 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 FOXD3Q9UJU5 478 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 M0R135 149 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ANGPTL7O43827 346 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 HOXB5P09067 269 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 CD79AP11912 226 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF93P35789 620 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 CLDN18P56856 261 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 SOX8P57073 446 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 SNRPEP62304 92 aaKnown RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 PSG4Q00888 419 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 PDZK1IP1Q13113 114 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 UNC119Q13432 240 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF766Q5HY98 468 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM244Q5VVB8 128 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 FDX2Q6P4F2 183 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ACOT7LQ6ZUV0 252 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 SLC16A14Q7RTX9 510 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 GJC3Q8NFK1 279 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 OR5AP2Q8NGF4 316 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 PHYHIPQ92561 330 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 FOXRED1Q96CU9 486 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF799Q96GE5 643 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 FOXB1Q99853 325 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 LRFN3Q9BTN0 628 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 CHMP1AQ9HD42 196 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ACKR4Q9NPB9 350 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF581Q9P0T4 197 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 B4GALT7Q9UBV7 327 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF629Q9UEG4 869 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 EDARQ9UNE0 448 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 PIGLQ9Y2B2 252 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 IGKV1-9A0A0C4DH69 117 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 A0A0D9SG52 128 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 C9JQL5 133 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 SGCEO43556 437 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 VAMP5O95183 116 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 CD1AP06126 327 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 ACKR3P25106 362 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 HTR5AP47898 357 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 RAB13P51153 203 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF84P51523 738 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 POLR2GP62487 172 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRIM55-202ENST00000315962 FLI1Q01543 452 aaPredicted RBP6.62□□□□□ -1.35
TRIM55-202ENST00000315962 SLC10A1Q14973 349 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF585AQ6P3V2 769 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 DNM1P46Q6ZS02 220 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 ASCL5Q7RTU5 278 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 NUFIP2Q7Z417 695 aaKnown RBP6.62□□□□□ -1.35
TRIM55-202ENST00000315962 ADGRE4PQ86SQ3 457 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 C20orf196Q8IYI0 205 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 CPEB3Q8NE35 698 aaKnown RBP6.62□□□□□ -1.35
TRIM55-202ENST00000315962 OR1M1Q8NGA1 313 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 UPB1Q9UBR1 384 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 KCNK7Q9Y2U2 307 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 SHANK1Q9Y566 2161 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 FAM230AA0A1W2PPH8 454 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 NPIPB13A6NJU9 1138 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 PRR33A8MZF0 331 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 LINC00587B1AMM8 73 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 NPIPB4C9JG80 1138 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 K7EM74 188 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 MPIG6BO95866 241 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 KNG1P01042 644 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 IFNA6P05013 189 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 SFTPBP07988 381 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 MUC1P15941 1255 aaPredicted RBP6.62□□□□□ -1.35
TRIM55-202ENST00000315962 ZBTB25P24278 435 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 UBE2V2Q15819 145 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 HIKESHIQ53FT3 197 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 GLIPR1L1Q6UWM5 242 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 DRAM2Q6UX65 266 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 LYG2Q86SG7 212 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 SLC22A24Q8N4F4 322 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 PAQR4Q8N4S7 273 aaPredicted RBP6.62□□□□□ -1.35
TRIM55-202ENST00000315962 KCNE4Q8WWG9 221 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM54Q969K7 222 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 RSRP1Q9BUV0 290 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 COL25A1Q9BXS0 654 aaPredicted RBP6.62□□□□□ -1.35
TRIM55-202ENST00000315962 GPR173Q9NS66 373 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 PRSS50Q9UI38 385 aa6.62□□□□□ -1.35
TRIM55-202ENST00000315962 CDRT15L2A8MXV6 281 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 KLRC4-KLRK1H3BQV0 150 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SOCS1O15524 211 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 KLK10O43240 276 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 EFSO43281 561 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SPRY1O43609 319 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 ISG15P05161 165 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 VSIG8P0DPA2 414 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 CD46P15529 392 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 IGFBP3P17936 291 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 AGTR1P30556 359 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 CD80P33681 288 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SNU13P55769 128 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms