RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 EGLN1Q9GZT9 426 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 ITGB1BP2Q9UKP3 347 aa15.34■□□□□ 0.05
HMGA1-201ENST00000311487 IGHV1-69-2A0A0G2JMI3 117 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 CYSRT1A8MQ03 144 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 AKR7A2O43488 359 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 F12P00748 615 aaPredicted RBP15.33■□□□□ 0.05
HMGA1-201ENST00000311487 ERCC1P07992 297 aaPredicted RBP15.33■□□□□ 0.05
HMGA1-201ENST00000311487 ELK1P19419 428 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 BDKRB2P30411 391 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 RBP2P50120 134 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 FUT6P51993 359 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 GNG3P63215 75 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 KISS1Q15726 138 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 PCGF3Q3KNV8 242 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 SFRP4Q6FHJ7 346 aaPredicted RBP15.33■□□□□ 0.05
HMGA1-201ENST00000311487 ZNF529Q6P280 563 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 LRRTM1Q86UE6 522 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 CDH24Q86UP0 819 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 CADM3Q8N126 398 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 JAGN1Q8N5M9 183 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 GPER1Q99527 375 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 GFI1Q99684 422 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 NEURL2Q9BR09 285 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 OR51I2Q9H344 312 aa15.33■□□□□ 0.05
HMGA1-201ENST00000311487 HNRNPCP07910 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
HMGA1-201ENST00000311487 SLC2A2P11168 524 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-201ENST00000311487 PTBP1P26599 531 aaKnown RBP eCLIP15.33■□□□□ 0.04
HMGA1-201ENST00000311487 CD200P41217 278 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 OR3A4PP47883 348 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 EFNA4P52798 201 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 P2RY14Q15391 338 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 DEFB113Q30KQ7 82 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 FAM209AQ5JX71 171 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 KRT74Q7RTS7 529 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 C1QL2Q7Z5L3 287 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 NEK6Q9HC98 313 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 TMEM138Q9NPI0 162 aa15.33■□□□□ 0.04
HMGA1-201ENST00000311487 NOTOA8MTQ0 251 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 FAM25AB3EWG3 89 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 FAM25CB3EWG5 89 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 FAM25GB3EWG6 89 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 WNT9BO14905 357 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 APOA1P02647 267 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 CD55P08174 381 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 RIN1Q13671 783 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 SLC25A26Q70HW3 274 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 SLAMF9Q96A28 289 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 DIRC2Q96SL1 478 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 WDR13Q9H1Z4 485 aa15.32■□□□□ 0.04
HMGA1-201ENST00000311487 PRRC2AP48634 2157 aaKnown RBP15.32■□□□□ 0.04
HMGA1-201ENST00000311487 F8VVB4 439 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 F8VWA3 439 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 TFF1P04155 84 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 EIF4EP06730 217 aaKnown RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 ADH4P08319 380 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 TNFRSF1AP19438 455 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 FSTP19883 344 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 ZNF93P35789 620 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 SCN1BQ07699 218 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 IL18Q14116 193 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 CCBE1Q6UXH8 406 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 LRRC28Q86X40 367 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 SPERTQ8NA61 448 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 ZBTB8BQ8NAP8 495 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 OR10K1Q8NGX5 313 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 KCNK15Q9H427 330 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 NARFLQ9H6Q4 476 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 ZNF701Q9NV72 531 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 FOXJ3Q9UPW0 622 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 OR5B21A6NL26 309 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 PAHP00439 452 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 PRKACBP22694 351 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 ATP1B3P54709 279 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 CLDN12P56749 244 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 TESK1Q15569 626 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 FAM76BQ5HYJ3 339 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 AVPI1Q5T686 147 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 WDR82Q6UXN9 313 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 SAMD12Q8N8I0 201 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 DEFB108BQ8NET1 73 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 NEU4Q8WWR8 484 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 CNTD2Q9H8S5 307 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 EXTL2Q9UBQ6 330 aa15.31■□□□□ 0.04
HMGA1-201ENST00000311487 PAIP2BQ9ULR5 123 aaKnown RBP15.31■□□□□ 0.04
HMGA1-201ENST00000311487 ZNF469Q96JG9 3925 aaPredicted RBP15.3■□□□□ 0.04
HMGA1-201ENST00000311487 IGHV3OR15-7A0A075B7D8 119 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 LRP5LA4QPB2 252 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 BOLA2-SMG1P6H3BVE0 249 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 TMEM225BP0DP42 221 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 EGR1P18146 543 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 NPBWR2P48146 333 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 RFX2P48378 723 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 SNU13P55769 128 aaKnown RBP15.3■□□□□ 0.04
HMGA1-201ENST00000311487 ASAH1Q13510 395 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 HFEQ30201 348 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 LHFPL2Q6ZUX7 228 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 LRRC29Q8WV35 223 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 AQP3Q92482 292 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 SPSB1Q96BD6 273 aa15.3■□□□□ 0.04
HMGA1-201ENST00000311487 SLITRK2Q9H156 845 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms