RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF346Q9UL40 294 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TNFSF18Q9UNG2 199 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 B9D1Q9UPM9 204 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 DHDHQ9UQ10 334 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 DTX4Q9Y2E6 619 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 KLHDC2Q9Y2U9 406 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RAI1Q7Z5J4 1906 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CR1P17927 2039 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CHD3Q12873 2000 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ALPK2Q86TB3 2170 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TRBV6-7A0A0A0MS04 114 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 TRAV14DV4A0A0A6YYC5 116 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM272A0A1B0GTI8 110 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 KANTRA0A1W2PQU2 76 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 DNAJC9-AS1A6NH13 148 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 OR5H14A6NHG9 310 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 OR6C76A6NM76 312 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CEACAM18A8MTB9 384 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 A8MVM7 634 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF736B4DX44 427 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ALG1L2C9J202 215 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 DNASE2O00115 360 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 DCTN6O00399 190 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 TSPAN4O14817 238 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 FGF16O43320 207 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PRKNO60260 465 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 SRSF10O75494 262 aaKnown RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 SLC25A12O75746 678 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 OR6A2O95222 327 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 SIX6O95475 246 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 IGKV3-11P04433 115 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ITGA5P08648 1049 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 TMIGD3P0DMS9 266 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ICAM2P13598 275 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PGCP20142 388 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CNR1P21554 472 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ZBTB25P24278 435 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CXCR1P25024 350 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CD40P25942 277 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 HSD11B1P28845 292 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CD34P28906 385 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 MAGEB1P43366 347 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 STARP49675 285 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 EFNB2P52799 333 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PNLIPRP2P54317 469 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CASP6P55212 293 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 SLC37A1P57057 533 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 MLF1P58340 268 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 SORDQ00796 357 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 FLI1Q01543 452 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 FOXI1Q12951 378 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 DHRS2Q13268 280 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 BTN1A1Q13410 526 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 MEP1BQ16820 701 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PNLIPRP3Q17RR3 467 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 C2orf68Q2NKX9 166 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 BEAN1Q3B7T3 259 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ACTBL2Q562R1 376 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PAN3Q58A45 887 aaKnown RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PABPC1L2AQ5JQF8 200 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 C10orf91Q5T1B1 145 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ATPAF1Q5TC12 328 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 DCAF12L2Q5VW00 463 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 AWAT2Q6E213 333 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 RTL6Q6ICC9 239 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 C11orf87Q6NUJ2 197 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.25□□□□□ -1.732e-9■■■■□ 19.6
CKS1B-201ENST00000308987 C16orf47Q6ZP98 133 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 Q71RC1 249 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 MDGA2Q7Z553 956 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 LYG2Q86SG7 212 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 RPS19BP1Q86WX3 136 aaKnown RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 LYPD6Q86Y78 171 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 MISPQ8IVT2 679 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CLRN3Q8NCR9 226 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 STEAP2Q8NFT2 490 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 OR52H1Q8NGJ2 320 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 OR52B4Q8NGK2 314 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 OR10K1Q8NGX5 313 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 DOK4Q8TEW6 326 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 CA5BP1Q8WTZ4 195 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 MITD1Q8WV92 249 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PCNPQ8WW12 178 aaKnown RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ASB5Q8WWX0 329 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 METTL21AQ8WXB1 218 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 AQP3Q92482 292 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 TAAR8Q969N4 342 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 MARC2Q969Z3 335 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ARSGQ96EG1 525 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 TSSK2Q96PF2 358 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 FOXC2Q99958 501 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 UQCC2Q9BRT2 126 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ATG5Q9H1Y0 275 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PCDHB16Q9NRJ7 776 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 LRFN1Q9P244 771 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 NDRG3Q9UGV2 375 aa4.25□□□□□ -1.73
CKS1B-201ENST00000308987 PURGQ9UJV8 347 aaKnown RBP4.25□□□□□ -1.73
CKS1B-201ENST00000308987 ANAPC10Q9UM13 185 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms