RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 LSM2Q9Y333 95 aaKnown RBP9.18□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CSPG4Q6UVK1 2322 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZNF879B4DU55 563 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PHF1O43189 567 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NDUFB3O43676 98 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NOS1APO75052 506 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 INMTO95050 263 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FSTP19883 344 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 BDKRB2P30411 391 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MAP2K4P45985 399 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IL13RA1P78552 427 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MLLT11Q13015 90 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CHRFAM7AQ494W8 412 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LRRC10Q5BKY1 277 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DDI2Q5TDH0 399 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CD276Q5ZPR3 534 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 WDR25Q64LD2 544 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FAHD2BQ6P2I3 314 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SATL1Q86VE3 508 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MS4A15Q8N5U1 240 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TEX29Q8N6K0 151 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR5T2Q8NGG2 359 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR5D18Q8NGL1 313 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ST8SIA4Q92187 359 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FAHD2AQ96GK7 314 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MED30Q96HR3 178 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZNF488Q96MN9 340 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CCL13Q99616 98 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MRI1Q9BV20 369 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 BEX2Q9BXY8 128 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FAM192AQ9GZU8 254 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SMURF1Q9HCE7 757 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 KAAG1Q9UBP8 84 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CTSZQ9UBR2 303 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR14J1Q9UGF5 321 aa9.17□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LOC105371242A0A075B767 164 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PPIAL4CA0A0B4J2A2 164 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 KIAA1324LA8MWY0 1029 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 J3QLI3 93 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DVL1O14640 695 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ENSAO43768 121 aaKnown RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 KNG1P01042 644 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ACAA1P09110 424 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMEM225BP0DP42 221 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PSG2P11465 335 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PSMA1P25786 263 aaKnown RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZFP36P26651 326 aaKnown RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SRP14P37108 136 aaKnown RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CAPZA1P52907 286 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RPS11P62280 158 aaKnown RBP eCLIP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PDZK1IP1Q13113 114 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IKZF1Q13422 519 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GPR50Q13585 617 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TRAM1Q15629 374 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 KISS1Q15726 138 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FAM120AOSQ5T036 256 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LIPKQ5VXJ0 399 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FAM216BQ8N7L0 139 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMEM185AQ8NFB2 350 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR51A2Q8NGJ7 313 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FCGR1BQ92637 280 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 S100A13Q99584 98 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MGLLQ99685 303 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NRIP2Q9BQI9 281 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TMEM138Q9NPI0 162 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ACOT13Q9NPJ3 140 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GLS2Q9UI32 602 aa9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 POLR3KQ9Y2Y1 108 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IGHV2-70DA0A0C4DH43 119 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 A0A1W2PPK0 400 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RFPL4AA6NLU0 287 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RFPL4AL1F8VTS6 287 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GPR37O15354 613 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SIGLEC5O15389 551 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 CRLF1O75462 422 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ECDO95905 644 aaPredicted RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ALDOBP05062 364 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NDUFB7P17568 137 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 PRKACAP17612 351 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SRD5A1P18405 259 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 BCL3P20749 454 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZNF93P35789 620 aaPredicted RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DOC2BQ14184 412 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ACSM3Q53FZ2 586 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ATPAF1Q5TC12 328 aaPredicted RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZNF788Q6ZQV5 615 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IL17RELQ6ZVW7 336 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZNF561Q8N587 486 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ZSCAN4Q8NAM6 433 aaPredicted RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 OR52N4Q8NGI2 321 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 ANGPTL6Q8NI99 470 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TNFAIP8L1Q8WVP5 186 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 H1FXQ92522 213 aaKnown RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 GAFA1Q96PS6 74 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DERL3Q96Q80 235 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NUDT16L1Q9BRJ7 211 aaKnown RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 C7orf69Q9H7B7 122 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms