RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 FADS2O95864 444 aaKnown RBP21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 ZNF19P17023 458 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 CCR9P51686 369 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 EGFL6Q8IUX8 553 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 PDZD9Q8IXQ8 264 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 CD177Q8N6Q3 437 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 Q8N7P7 452 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 BORCS8Q96FH0 119 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 RDH12Q96NR8 316 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 INPP5EQ9NRR6 644 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 CAB39Q9Y376 341 aaPredicted RBP21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 POMT1Q9Y6A1 747 aa21.73■■□□□ 1.07
CDKN2A-201ENST00000304494 MELTFP08582 738 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 ERVK11-1P61568 191 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 RAB40BQ12829 278 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 GALEQ14376 348 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 ZNF555Q8NEP9 628 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 SSMEM1Q8WWF3 244 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 C4orf36Q96KX1 117 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 ALG8Q9BVK2 526 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 METTL8Q9H825 291 aaKnown RBP21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 ELL3Q9HB65 397 aaPredicted RBP21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 RPL36Q9Y3U8 105 aaKnown RBP21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 TENM1Q9UKZ4 2725 aa21.72■■□□□ 1.07
CDKN2A-201ENST00000304494 A0A1W2PPH5 198 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 KNG1P01042 644 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 ZNF20P17024 532 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 EEF1B2P24534 225 aaKnown RBP21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 NANOS3P60323 173 aaKnown RBP21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 NCR3LG1Q68D85 454 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 SYS1Q8N2H4 156 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 DNAAF1Q8NEP3 725 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 TBC1D15Q8TC07 691 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 PELI1Q96FA3 418 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 CEP19Q96LK0 163 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 UNKLQ9H9P5 680 aaKnown RBP21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 SMPD3Q9NY59 655 aaPredicted RBP21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 FAM96BQ9Y3D0 163 aa21.71■■□□□ 1.07
CDKN2A-201ENST00000304494 A0A0U1RQK1 487 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 IGHA1P01876 353 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 RBP2P50120 134 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 UTS2BQ765I0 119 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 LHFPL3Q86UP9 236 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 FAM185AQ8N0U4 392 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 BATF2Q8N1L9 274 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 PIP4P2Q8N4L2 257 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 OR14J1Q9UGF5 321 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 HHLA2Q9UM44 414 aa21.7■■□□□ 1.06
CDKN2A-201ENST00000304494 IGKV1-27A0A075B6S5 117 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 RNASEK-C17orf49H0YIS7 233 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 RPSAP08865 295 aaKnown RBP21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 PRKACBP22694 351 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 CEBPDP49716 269 aaPredicted RBP21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 ATP1B3P54709 279 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 MRPL28Q13084 256 aaKnown RBP21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 KLHL22Q53GT1 634 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 LDLRAD3Q86YD5 345 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 ZNF676Q8N7Q3 588 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 OR5D13Q8NGL4 314 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 FGGYQ96C11 551 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 ADAT3Q96EY9 351 aaPredicted RBP21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 FAM234AQ9H0X4 552 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 AMBNQ9NP70 447 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 TNFRSF19Q9NS68 423 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 MTCH1Q9NZJ7 389 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 MYRFQ9Y2G1 1151 aa21.69■■□□□ 1.06
CDKN2A-201ENST00000304494 H0YAE9 185 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 NPFFO15130 113 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 CRYBA1P05813 215 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 RPL31P62899 125 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 ALKBH1Q13686 389 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 SLC25A26Q70HW3 274 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 Q8IYB0 196 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 OR13C3Q8NGS6 347 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 TNFRSF14Q92956 283 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 SLAMF9Q96A28 289 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 SPSB1Q96BD6 273 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 C19orf12Q9NSK7 152 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 MRPS18AQ9NVS2 196 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 ERVK13-1Q9NX77 482 aa21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.68■■□□□ 1.06
CDKN2A-201ENST00000304494 CYB5AP00167 134 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 TK1P04183 234 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 FBP1P09467 338 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 OCM2P0CE71 109 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 OCMP0CE72 109 aaPredicted RBP21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 ATF1P18846 271 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 UBE2E1P51965 193 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 LPCAT4Q643R3 524 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 FIP1L1Q6UN15 594 aaKnown RBP21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 LHFPL2Q6ZUX7 228 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 MKXQ8IYA7 352 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 HAVCR2Q8TDQ0 301 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 ZNF747Q9BV97 191 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 CHIAQ9BZP6 476 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 DPAGT1Q9H3H5 408 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 C8orf4Q9NR00 106 aa21.67■■□□□ 1.06
CDKN2A-201ENST00000304494 FAM181BA6NEQ2 426 aa21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 OR4C45A6NMZ5 311 aa21.66■■□□□ 1.06
CDKN2A-201ENST00000304494 CHRM2P08172 466 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms