RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LRFN3Q9BTN0 628 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 IGHV1OR15-9A0A0B4J2B8 117 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 OR5AC1P0C628 307 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 CCL2P13500 99 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 GNG10P50151 68 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 NOVA1P51513 510 aaKnown RBP12.39□□□□□ -0.43
PRKCB-201ENST00000303531 LRRC10Q5BKY1 277 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 FAM162BQ5T6X4 162 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 TMPRSS5Q9H3S3 457 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 FLRT3Q9NZU0 649 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 LPAR6P43657 344 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 SLC38A11Q08AI6 406 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 RNF151Q2KHN1 245 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 DUSP18Q8NEJ0 188 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 RFESDQ8TAC1 157 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 MBD1Q9UIS9 605 aaPredicted RBP12.39□□□□□ -0.43
PRKCB-201ENST00000303531 CCL27Q9Y4X3 112 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 WSB1Q9Y6I7 421 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 ST8SIA5O15466 376 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 NDUFB3O43676 98 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 PDCD6O75340 191 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 SLC6A1P30531 599 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 M1APQ8TC57 530 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 V9GYH0 126 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 MED19A0JLT2 244 aaPredicted RBP12.38□□□□□ -0.43
PRKCB-201ENST00000303531 FCGR3BO75015 233 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 TNFRSF1AP19438 455 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 PIK3IP1Q96FE7 263 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 GPR137Q96N19 417 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 HES4Q9HCC6 221 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 CCDC88CQ9P219 2028 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 SELENOPP49908 381 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 ASB10Q8WXI3 467 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 FAM24AA6NFZ4 105 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 GALNSP34059 522 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 SRSF5Q13243 272 aaKnown RBP12.38□□□□□ -0.43
PRKCB-201ENST00000303531 CD226Q15762 336 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 MICBQ29980 383 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 MESTQ5EB52 335 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 SSX7Q7RTT5 188 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 GABRG3Q99928 467 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 ZFP64Q9NPA5 681 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 PSG11Q9UQ72 335 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 YBX2Q9Y2T7 364 aaKnown RBP12.38□□□□□ -0.43
PRKCB-201ENST00000303531 LSM2Q9Y333 95 aaKnown RBP12.38□□□□□ -0.43
PRKCB-201ENST00000303531 ZNF83P51522 516 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 ZNF764Q96H86 408 aaPredicted RBP12.38□□□□□ -0.43
PRKCB-201ENST00000303531 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 PHOX2AO14813 284 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 FAM109BQ6ICB4 259 aaPredicted RBP12.38□□□□□ -0.43
PRKCB-201ENST00000303531 GFRALQ6UXV0 394 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 FAM96BQ9Y3D0 163 aa12.38□□□□□ -0.43
PRKCB-201ENST00000303531 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 OR8B12Q8NGG6 310 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 TOLLIPQ9H0E2 274 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 TRBV5-3A0A0A0MS03 114 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 PRSS12P56730 875 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 C10orf111Q8N326 155 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.37□□□□□ -0.43
PRKCB-201ENST00000303531 NXPH1P58417 271 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 CACNG5Q9UF02 275 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 OGG1O15527 345 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 PSG6Q00889 435 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 B3GNTL1Q67FW5 361 aaPredicted RBP12.37□□□□□ -0.43
PRKCB-201ENST00000303531 PWWP2BQ6NUJ5 590 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 OR2T6Q8NHC8 308 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 FRRS1LQ9P0K9 344 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 TRAPPC1Q9Y5R8 145 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 CALCRP30988 508 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 Q3ZCU0 254 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 DHRS13Q6UX07 377 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 MOB3AQ96BX8 217 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 FBP1P09467 338 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 TPPP2P59282 170 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 C1QL3Q5VWW1 255 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 ST6GAL2Q96JF0 529 aa12.37□□□□□ -0.43
PRKCB-201ENST00000303531 IGHA1P01876 353 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 MDH2P40926 338 aaKnown RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 FAM3AP98173 230 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 MOGAT2Q3SYC2 334 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 MRM1Q6IN84 353 aaKnown RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 ZNF770Q6IQ21 691 aaPredicted RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 JMJD6Q6NYC1 403 aaPredicted RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 LYG1Q8N1E2 194 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 OR4D9Q8NGE8 314 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 PECRQ9BY49 303 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 FBXL17Q9UF56 701 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 CYB5R1Q9UHQ9 305 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 SEC16AO15027 2179 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 CRYABP02511 175 aaKnown RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 NPEPL1Q8NDH3 523 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 MMP24Q9Y5R2 645 aa12.36□□□□□ -0.43
PRKCB-201ENST00000303531 GSTZ1O43708 216 aaPredicted RBP12.36□□□□□ -0.43
PRKCB-201ENST00000303531 IGFBP7Q16270 282 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms