RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 ARF6P62330 175 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 RELBQ01201 579 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 Q6YL49 198 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 VMO1Q7Z5L0 202 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 LHFPL3Q86UP9 236 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 ZNF573Q86YE8 665 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 C10orf67Q8IYJ2 551 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 PACRGLQ8N7B6 248 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 PP6455Q8WZ26 134 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 ST8SIA4Q92187 359 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 TAF15Q92804 592 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLCC1-201ENST00000302500 ALG8Q9BVK2 526 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 INPP5EQ9NRR6 644 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 C19orf12Q9NSK7 152 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 IL36RNQ9UBH0 155 aa9.22□□□□□ -0.93
CLCC1-201ENST00000302500 SLC25A10Q9UBX3 287 aaPredicted RBP9.22□□□□□ -0.93
CLCC1-201ENST00000302500 SIRT4Q9Y6E7 314 aaPredicted RBP9.22□□□□□ -0.93
CLCC1-201ENST00000302500 PRKDCP78527 4128 aaKnown RBP9.21□□□□□ -0.93
CLCC1-201ENST00000302500 RFPL4AA6NLU0 287 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 RFPL4AL1F8VTS6 287 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 TRIM77I1YAP6 450 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 M0R1W7 72 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 MELTFP08582 738 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 CFPP27918 469 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 NPBWR2P48146 333 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 ZP1P60852 638 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 GMFBP60983 142 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 IKZF1Q13422 519 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 ALKBH1Q13686 389 aaKnown RBP9.21□□□□□ -0.94
CLCC1-201ENST00000302500 PDCD1Q15116 288 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 RCN1Q15293 331 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 TMEM244Q5VVB8 128 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 C17orf107Q6ZR85 190 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 KCTD8Q6ZWB6 473 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 COMMD2Q86X83 199 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 PARP16Q8N5Y8 322 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 ZNF671Q8TAW3 534 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 CNIH3Q8TBE1 160 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 TMIGD2Q96BF3 282 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 MED30Q96HR3 178 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 DUX5Q96PT3 197 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 JMJD8Q96S16 334 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 PCGF1Q9BSM1 259 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 ZMAT3Q9HA38 289 aaKnown RBP9.21□□□□□ -0.94
CLCC1-201ENST00000302500 FKBP14Q9NWM8 211 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 GTF2A1LQ9UNN4 478 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 PCDHGB1Q9Y5G3 927 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 ORC6Q9Y5N6 252 aa9.21□□□□□ -0.94
CLCC1-201ENST00000302500 TRBV23-1A0A0A0MS06 115 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 A0A0U1RQK1 487 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 A0A1B0GVI7 797 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 DAPL1A0PJW8 107 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 TMEM82A0PJX8 343 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 ANKRD65E5RJM6 399 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 K7N7A8 449 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 HOXA3O43365 443 aaPredicted RBP9.2□□□□□ -0.94
CLCC1-201ENST00000302500 NDUFB3O43676 98 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 KNG1P01042 644 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 PRDX2P32119 198 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 ETV1P50549 477 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 FUT6P51993 359 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 GTF2A1P52655 376 aaPredicted RBP9.2□□□□□ -0.94
CLCC1-201ENST00000302500 RPS11P62280 158 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLCC1-201ENST00000302500 ACTA2P62736 377 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 ACTG2P63267 376 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 PRB3Q04118 309 aaPredicted RBP9.2□□□□□ -0.94
CLCC1-201ENST00000302500 AWAT1Q58HT5 328 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 LRRC10Q5BKY1 277 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 LDLRAD2Q5SZI1 272 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 TMEM200BQ69YZ2 307 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 ZNF561Q8N587 486 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 Q8NFD4 153 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 TRMT10AQ8TBZ6 339 aaKnown RBP9.2□□□□□ -0.94
CLCC1-201ENST00000302500 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 NKX1-2Q9UD57 310 aaPredicted RBP9.2□□□□□ -0.94
CLCC1-201ENST00000302500 KIAA2026Q5HYC2 2103 aa9.2□□□□□ -0.94
CLCC1-201ENST00000302500 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 J3QLW9 94 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 OGG1O15527 345 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 FADS2O95864 444 aaKnown RBP9.19□□□□□ -0.94
CLCC1-201ENST00000302500 TK1P04183 234 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 ZNF19P17023 458 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 ATF1P18846 271 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 AZGP1P25311 298 aaKnown RBP9.19□□□□□ -0.94
CLCC1-201ENST00000302500 KLRD1Q13241 179 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 ZNF273Q14593 569 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 ZNF146Q15072 292 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 SMIM21Q3B7S5 101 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 GPR157Q5UAW9 335 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 METTL11BQ5VVY1 283 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 FAM220AQ7Z4H9 259 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 BATF2Q8N1L9 274 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 PNKDQ8N490 385 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 TMEM86BQ8N661 226 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 OR52N4Q8NGI2 321 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 NPRL2Q8WTW4 380 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 C17orf50Q8WW18 174 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 NRG4Q8WWG1 115 aa9.19□□□□□ -0.94
CLCC1-201ENST00000302500 LHX4Q969G2 390 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms