RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 BOD1Q96IK1 185 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 SOX7Q9BT81 388 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 MIXL1Q9H2W2 232 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 GLRX2Q9NS18 164 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 MRPS18AQ9NVS2 196 aaKnown RBP8.9□□□□□ -0.99
GABRB3-201ENST00000299267 LSM2Q9Y333 95 aaKnown RBP8.9□□□□□ -0.99
GABRB3-201ENST00000299267 A0A087WV48 116 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 TRIM64A6NGJ6 449 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 CLINT1Q14677 625 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 MICBQ29980 383 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 SMIM21Q3B7S5 101 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 PIGYQ3MUY2 71 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 MFSD4AQ8N468 514 aa8.9□□□□□ -0.99
GABRB3-201ENST00000299267 UNC80Q8N2C7 3258 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 A0A0B4J2A0 478 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 ANKRD33BA6NCL7 494 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 PYCARD-AS1I3L0S3 204 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 IFNA4P05014 189 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 CATR1Q13166 79 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 PRAMEF6Q5VXH4 476 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 ALKAL2Q6UX46 152 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 DPPA2Q7Z7J5 298 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 SGK3Q96BR1 496 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 ASF1BQ9NVP2 202 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 SHPKQ9UHJ6 478 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 PCDH15Q96QU1 1955 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 NKX6-1P78426 367 aaPredicted RBP8.89□□□□□ -0.99
GABRB3-201ENST00000299267 C1orf185Q5T7R7 199 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 C1orf87Q8N0U7 546 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 ZNF486Q96H40 463 aaPredicted RBP8.89□□□□□ -0.99
GABRB3-201ENST00000299267 PRO3102Q9H379 93 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 SCPEP1Q9HB40 452 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 PPIHO43447 177 aaKnown RBP8.89□□□□□ -0.99
GABRB3-201ENST00000299267 ETV6P41212 452 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 FAM27E3Q08E93 113 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 TMEM211Q6ICI0 200 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 MOGAT3Q86VF5 341 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 SPACA3Q8IXA5 215 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 TPRX1Q8N7U7 411 aa8.89□□□□□ -0.99
GABRB3-201ENST00000299267 A0A0A6YYJ9 748 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 TRIM64CA6NLI5 447 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 AHRRA9YTQ3 701 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 CD3EP07766 207 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 HIST1H1DP16402 221 aaKnown RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 ZNF362Q5T0B9 420 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 WDR13Q9H1Z4 485 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 RAB9BQ9NP90 201 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 UBQLN2Q9UHD9 624 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 COL4A3Q01955 1670 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 ZNF705EA8MWA4 302 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 KCNJ8Q15842 424 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 RNLSQ5VYX0 342 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 ZNF826PQ6ZT77 177 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 SLC7A5P1Q8MH63 180 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 ZNF441Q8N8Z8 693 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 TMEM104Q8NE00 496 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 UQCC2Q9BRT2 126 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 ZNF426Q9BUY5 554 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 CLDN16Q9Y5I7 305 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 PLXND1Q9Y4D7 1925 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 SONP18583 2426 aaKnown RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 CLDN1O95832 211 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 GLAP06280 429 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 TNFRSF1AP19438 455 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 SNCAP37840 140 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 MMP15P51511 669 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 PIGPP57054 158 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 FAM76BQ5HYJ3 339 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 OR5T1Q8NG75 326 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 OR6S1Q8NH40 331 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 CD300LFQ8TDQ1 290 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 RAB39BQ96DA2 213 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 SEH1LQ96EE3 360 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 EIF5A2Q9GZV4 153 aaKnown RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 MAGT1Q9H0U3 335 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 SSX5O60225 188 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 ATG12O94817 140 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 VSIG8P0DPA2 414 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 CALCRP30988 508 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 RAP2BP61225 183 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 LINC00299Q6ZSB3 139 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 ZFP62Q8NB50 900 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 CPEB3Q8NE35 698 aaKnown RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 MRGPRDQ8TDS7 321 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 RTN4IP1Q8WWV3 396 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 HDHD3Q9BSH5 251 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 PARP12Q9H0J9 701 aaKnown RBP8.88□□□□□ -0.99
GABRB3-201ENST00000299267 KCNMB2Q9Y691 235 aa8.88□□□□□ -0.99
GABRB3-201ENST00000299267 IGHV3OR15-7A0A075B7D8 119 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 M0R036 132 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 TMPRSS2O15393 492 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 PIN1P1O15428 100 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 LANCL1O43813 399 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 ADRB1P08588 477 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 PGLYRP3Q96LB9 341 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 PRR13Q9NZ81 148 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 GHRLQ9UBU3 117 aa8.87□□□□□ -0.99
GABRB3-201ENST00000299267 ERRFI1Q9UJM3 462 aaPredicted RBP8.87□□□□□ -0.99
GABRB3-201ENST00000299267 TERTO14746 1132 aaKnown RBP8.87□□□□□ -0.99
GABRB3-201ENST00000299267 CYTIPO60759 359 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms