RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 MTCH1Q9NZJ7 389 aa17.6■□□□□ 0.41
PACSIN3-201ENST00000298838 TRAV18A0A075B6X5 111 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 IGHV3-64DA0A0J9YX35 117 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 M0R233 179 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 RAB27BO00194 218 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 CDIPTO14735 213 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 HLA-DQB1P01920 261 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 RNF224P0DH78 156 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 BCL3P20749 454 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 NPBWR2P48146 333 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 MOGAT2Q3SYC2 334 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 OR8H2Q8N162 312 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 Q96M66 194 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 DHRS9Q9BPW9 319 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 NUDT16L1Q9BRJ7 211 aaKnown RBP17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 TLNRD1Q9H1K6 362 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 ABCB10Q9NRK6 738 aa17.59■□□□□ 0.41
PACSIN3-201ENST00000298838 RHBDL1O75783 438 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 TNFSF4P23510 183 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 EFNB3Q15768 340 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 ZNF181Q2M3W8 571 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 ELP2Q6IA86 826 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 CELF2-AS1Q8N7Q2 184 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 Q8NFD4 153 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 OR10R2Q8NGX6 335 aa17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 LILRB1Q8NHL6 650 aaPredicted RBP17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 KLF2Q9Y5W3 355 aaPredicted RBP17.58■□□□□ 0.41
PACSIN3-201ENST00000298838 A0A0A6YYD4 124 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 A6NLC8 198 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 CTDSPLO15194 276 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 SRP9P49458 86 aaKnown RBP17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 MRPS10P82664 201 aaKnown RBP17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 BAK1Q16611 211 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 PRAMEF6Q5VXH4 476 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 FBXL14Q8N1E6 418 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM89BQ8N5H3 189 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 OR2V2Q96R30 315 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 DIRC2Q96SL1 478 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 RHOFQ9HBH0 211 aa17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 RBFOX1Q9NWB1 397 aaKnown RBP17.58■□□□□ 0.4
PACSIN3-201ENST00000298838 ABCA4P78363 2273 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 B9A039 149 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 PTBP3O95758 552 aaKnown RBP17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 IGHV1-46P01743 117 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 IL7P13232 177 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 FGF12P61328 243 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 Q8IYB0 196 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 BATF2Q8N1L9 274 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 CHST4Q8NCG5 386 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 ST3GAL6Q9Y274 331 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 PKDREJQ9NTG1 2253 aa17.57■□□□□ 0.4
PACSIN3-201ENST00000298838 CSF3P09919 207 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 RBM11P57052 281 aaKnown RBP17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 TNFAIP6P98066 277 aaPredicted RBP17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 MPPED2Q15777 294 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 PIGYQ3MUY2 71 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 MEX3BQ6ZN04 569 aaKnown RBP17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 MUC15Q8N387 334 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 SMIM4Q8WVI0 70 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 RAB3CQ96E17 227 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 MEGF10Q96KG7 1140 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 C17orf100A8MU93 164 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 F8VVB4 439 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 F8VWA3 439 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 SOCS1O15524 211 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 AKR7A2O43488 359 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 ADH4P08319 380 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 GABRR1P24046 479 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 IFITM3Q01628 133 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 TRIQKQ629K1 86 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 C11orf53Q8IXP5 236 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 GCDHQ92947 438 aaPredicted RBP17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 ZNF488Q96MN9 340 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 AUNIPQ9H7T9 357 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 DYNLRB1Q9NP97 96 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 UFSP2Q9NUQ7 469 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 IL19Q9UHD0 177 aa17.56■□□□□ 0.4
PACSIN3-201ENST00000298838 CHD3Q12873 2000 aaKnown RBP17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 ACAA1P09110 424 aaPredicted RBP17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 PGA5P0DJD9 388 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 DGCR2P98153 550 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 TAF9Q16594 264 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 NHLRC3Q5JS37 347 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 STEAP3Q658P3 488 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 ITLN1Q8WWA0 313 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 EMG1Q92979 244 aaKnown RBP17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 FBXW5Q969U6 566 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 POM121Q96HA1 1249 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 NRIP2Q9BQI9 281 aa17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 THAP7Q9BT49 309 aaPredicted RBP17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 ZMAT3Q9HA38 289 aaKnown RBP17.55■□□□□ 0.4
PACSIN3-201ENST00000298838 hCG_1807616A0A1W2PRN6 198 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 GABARAPH6UMI1 98 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 GEMIN2O14893 280 aaKnown RBP17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 GSTZ1O43708 216 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 PTHLHP12272 177 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 PRKACAP17612 351 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 BLVRBP30043 206 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 GATA4P43694 442 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 DAZAP2Q15038 168 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms