RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 OR5AS1Q8N127 324 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 TMEM217Q8N7C4 229 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 OR5L1Q8NGL2 311 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 M1APQ8TC57 530 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 STT3BQ8TCJ2 826 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 DYRK2Q92630 601 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 GPHA2Q96T91 129 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 S1PR5Q9H228 398 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 AK3Q9UIJ7 227 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 NXT1Q9UKK6 140 aaKnown RBP11.83□□□□□ -0.52
SKA3-201ENST00000298260 MCTS1Q9ULC4 181 aaKnown RBP11.83□□□□□ -0.52
SKA3-201ENST00000298260 TDRD6O60522 2096 aaKnown RBP11.83□□□□□ -0.52
SKA3-201ENST00000298260 HSPB2A8KAH6 182 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 PAX1P15863 534 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 ZNF20P17024 532 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 TUBG1P23258 451 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 GLIPR1P48060 266 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 FOXO1Q12778 655 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 P2RY6Q15077 328 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 HSPB2Q16082 182 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 FNDC7Q5VTL7 733 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 OGFOD3Q6PK18 319 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 OR5D14Q8NGL3 314 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 OR11L1Q8NGX0 322 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 EMG1Q92979 244 aaKnown RBP11.83□□□□□ -0.52
SKA3-201ENST00000298260 DGAT2Q96PD7 388 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 NIPSNAP3BQ9BS92 247 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 FAM206AQ9NX38 181 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 VSX1Q9NZR4 365 aaPredicted RBP11.83□□□□□ -0.52
SKA3-201ENST00000298260 TUBD1Q9UJT1 453 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 SRPK3Q9UPE1 567 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
SKA3-201ENST00000298260 ELOA3CA0A087WX78 387 aaPredicted RBP11.82□□□□□ -0.52
SKA3-201ENST00000298260 FIGNL2A6NMB9 653 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 OPN1LWP04000 364 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 ISG15P05161 165 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 PIGPP57054 158 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 GPM6BQ13491 265 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 FZD2Q14332 565 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 JOSD1Q15040 202 aaPredicted RBP11.82□□□□□ -0.52
SKA3-201ENST00000298260 ZNF542PQ5EBM4 170 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 OR10S1Q8NGN2 331 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 OR2AJ1Q8NGZ0 328 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 RSC1A1Q92681 617 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 ELSPBP1Q96BH3 223 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 TVP23CQ96ET8 276 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 LIN37Q96GY3 246 aaPredicted RBP11.82□□□□□ -0.52
SKA3-201ENST00000298260 GPR87Q9BY21 358 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.82□□□□□ -0.52
SKA3-201ENST00000298260 SLC7A11Q9UPY5 501 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 CLDN16Q9Y5I7 305 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 FRYLO94915 3013 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 E5RGE8 158 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 PNLIPP16233 465 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 EPHA1P21709 976 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 FGF7P21781 194 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 PRSS12P56730 875 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 RAB11AP62491 216 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 FAM180AQ6UWF9 173 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 OR2M4Q96R27 311 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 OR8D2Q9GZM6 311 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 HRASLS2Q9NWW9 162 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 THAP10Q9P2Z0 257 aaPredicted RBP11.82□□□□□ -0.52
SKA3-201ENST00000298260 NSG2Q9Y328 171 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 NSG1A0A0A6YYJ2 146 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 FTCDNL1E5RQL4 147 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 CST7O76096 145 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 KAT7O95251 611 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 GSTP1P09211 210 aaKnown RBP11.82□□□□□ -0.52
SKA3-201ENST00000298260 FBXW12Q6X9E4 464 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 MEX3BQ6ZN04 569 aaKnown RBP11.82□□□□□ -0.52
SKA3-201ENST00000298260 ZNF440Q8IYI8 595 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 TMEM171Q8WVE6 324 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 HAS2Q92819 552 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 TXNIPQ9H3M7 391 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 PLEKHA2Q9HB19 425 aa11.82□□□□□ -0.52
SKA3-201ENST00000298260 CCDC187A0A096LP49 1063 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 A6NIZ1 184 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 MSTNO14793 375 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 EDN3P14138 238 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 GABRR1P24046 479 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 RAP1BP61224 184 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 COL10A1Q03692 680 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 SLC10A1Q14973 349 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 THNSL2Q86YJ6 484 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 C20orf196Q8IYI0 205 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 LRRC18Q8N456 261 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 OR4X1Q8NH49 305 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 SLAMF6Q96DU3 332 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 SHDQ96IW2 340 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 E9PLN8 166 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 THEGLP0DJG4 465 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 CD33P20138 364 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 CDAP32320 146 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 MMP16P51512 607 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 NCR3LG1Q68D85 454 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 BTNL3Q6UXE8 466 aa11.81□□□□□ -0.52
SKA3-201ENST00000298260 PLPP5Q8NEB5 264 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms