RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBAP1-201ENST00000297661 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 SEC14L6B5MCN3 397 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 K7EPK0 472 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 GAPDHP04406 335 aaKnown RBP13.68□□□□□ -0.22
UBAP1-201ENST00000297661 ISG15P05161 165 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 FCGR2CP31995 323 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 SFTPDP35247 375 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 FHITP49789 147 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 FAM3AP98173 230 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 C17orf67Q0P5P2 114 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 ZNF674Q2M3X9 581 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 GFI1BQ5VTD9 330 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 KLHL24Q6TFL4 600 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 ANKRD37Q7Z713 158 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 FAM71E2Q8N5Q1 922 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 TMEM104Q8NE00 496 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 OR10G3Q8NGC4 313 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 SLC35B3Q9H1N7 401 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 B3GAT1Q9P2W7 334 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 IFNA10P01566 189 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 UCP2P55851 309 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 CLDN6P56747 220 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 TMEM33P57088 247 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 ZNF610Q8N9Z0 462 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 MUCL1Q96DR8 90 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 FAM71F1Q96KD3 344 aaPredicted RBP13.68□□□□□ -0.22
UBAP1-201ENST00000297661 ZNF319Q9P2F9 582 aa13.68□□□□□ -0.22
UBAP1-201ENST00000297661 LOC390937A0A1W2PQ73 354 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 LIPT2A6NK58 231 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 VSTM2BA6NLU5 285 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 ZNF726A6NNF4 738 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 ZNF708P17019 499 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 ABHD12BQ7Z5M8 362 aaPredicted RBP13.67□□□□□ -0.22
UBAP1-201ENST00000297661 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 TMEM68Q96MH6 324 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 C2orf88Q9BSF0 95 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 CNTNAP3Q9BZ76 1288 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 PISDQ9UG56 409 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 C5orf63A6NC05 138 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 RER1O15258 196 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 SOD3P08294 240 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 MMP16P51512 607 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 KHDC3LQ587J8 217 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 TRIM61Q5EBN2 209 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 OR5D18Q8NGL1 313 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 NPRL2Q8WTW4 380 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 DDIT4LQ96D03 193 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 OR6C1Q96RD1 312 aa13.67□□□□□ -0.22
UBAP1-201ENST00000297661 AKIRIN1Q9H9L7 192 aaPredicted RBP13.67□□□□□ -0.22
UBAP1-201ENST00000297661 PPP1R2P9O14990 202 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 GDF9O60383 454 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BKO60814 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 OR2J2O76002 312 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BJP06899 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 GIMD1P0DJR0 217 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 GLB1P16278 677 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BOP23527 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BBP33778 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 OR3A4PP47883 348 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 CAMLGP49069 296 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 CLRN1P58418 232 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BDP58876 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BCP62807 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST2H2BEQ16778 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 PCK2Q16822 640 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.66□□□□□ -0.22
UBAP1-201ENST00000297661 LCN10Q6JVE6 187 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 OPN5Q6U736 354 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 ST8SIA1Q92185 356 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BHQ93079 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 NTNG2Q96CW9 530 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 NEU1Q99519 415 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BNQ99877 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HIST1H2BMQ99879 126 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 PILRBQ9UKJ0 227 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 LHFPL6Q9Y693 200 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 ZNF727A8MUV8 499 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 MPIG6BO95866 241 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 HSD11B1P28845 292 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 ZNF93P35789 620 aaPredicted RBP13.66□□□□□ -0.22
UBAP1-201ENST00000297661 MPLP40238 635 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 APOBEC1P41238 236 aaKnown RBP13.66□□□□□ -0.22
UBAP1-201ENST00000297661 CASP6P55212 293 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 NKAIN1Q4KMZ8 207 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 RPUSD3Q6P087 351 aaKnown RBP13.66□□□□□ -0.22
UBAP1-201ENST00000297661 TGIF2LXQ8IUE1 241 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 NKAIN3Q8N8D7 197 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 PLPP5Q8NEB5 264 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 NFAM1Q8NET5 270 aaPredicted RBP13.66□□□□□ -0.22
UBAP1-201ENST00000297661 JSRP1Q96MG2 331 aaPredicted RBP13.66□□□□□ -0.22
UBAP1-201ENST00000297661 RTBDNQ9BSG5 229 aaPredicted RBP13.66□□□□□ -0.22
UBAP1-201ENST00000297661 SUCNR1Q9BXA5 334 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 MEMO1Q9Y316 297 aa13.66□□□□□ -0.22
UBAP1-201ENST00000297661 COL5A1P20908 1838 aaPredicted RBP13.65□□□□□ -0.22
UBAP1-201ENST00000297661 A0A0A6YYD4 124 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms