RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 OR2AT4A6NND4 320 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 ZNF850A8MQ14 1090 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 HTR3BO95264 441 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 SIX6O95475 246 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 ZNF14P17017 642 aaPredicted RBP18.37■□□□□ 0.53
SOX17-201ENST00000297316 NAT1P18440 290 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 DNASE1P24855 282 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 TMPRSS3P57727 454 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 PNLIPRP3Q17RR3 467 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 LHFPL2Q6ZUX7 228 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 C6orf201Q7Z4U5 140 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 CXorf67Q86X51 503 aaPredicted RBP18.37■□□□□ 0.53
SOX17-201ENST00000297316 OR4K15Q8NH41 348 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 RADILQ96JH8 1075 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 ZNF230Q9UIE0 474 aaPredicted RBP18.37■□□□□ 0.53
SOX17-201ENST00000297316 OR4E1P0C645 316 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 COX5AP20674 150 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 MPZP25189 248 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 SSTR2P30874 369 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 ARFRP1Q13795 201 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 SPATA46Q5T0L3 261 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 C1orf185Q5T7R7 199 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 SIGIRRQ6IA17 410 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 CCDC28AQ8IWP9 274 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 UXS1Q8NBZ7 420 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 METTL9Q9H1A3 318 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 FN3KRPQ9HA64 309 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 PROCRQ9UNN8 238 aa18.37■□□□□ 0.53
SOX17-201ENST00000297316 MSTNO14793 375 aa18.36■□□□□ 0.53
SOX17-201ENST00000297316 CPT2P23786 658 aa18.36■□□□□ 0.53
SOX17-201ENST00000297316 TDGF1P3P51864 188 aa18.36■□□□□ 0.53
SOX17-201ENST00000297316 MRPL21Q7Z2W9 205 aaKnown RBP18.36■□□□□ 0.53
SOX17-201ENST00000297316 BHLHE23Q8NDY6 225 aa18.36■□□□□ 0.53
SOX17-201ENST00000297316 PRRT1Q99946 306 aa18.36■□□□□ 0.53
SOX17-201ENST00000297316 OCSTAMPQ9BR26 566 aa18.36■□□□□ 0.53
SOX17-201ENST00000297316 ALX4Q9H161 411 aaPredicted RBP18.36■□□□□ 0.53
SOX17-201ENST00000297316 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.36■□□□□ 0.53
SOX17-201ENST00000297316 KCNN3Q9UGI6 736 aa18.36■□□□□ 0.53
SOX17-201ENST00000297316 ZNF81P51508 661 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 H2BFSP57053 126 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 RSU1Q15404 277 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 FAM189A2Q15884 450 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 KRTCAP3Q53RY4 240 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 ASCL4Q6XD76 172 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 CALHM1Q8IU99 346 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 DPCDQ9BVM2 203 aaPredicted RBP18.35■□□□□ 0.53
SOX17-201ENST00000297316 PLEKHA6Q9Y2H5 1048 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 ESPL1Q14674 2120 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 UBE2QL1A1L167 161 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 LINC00862A6NCI5 91 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 LILRA1O75019 489 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 WDR1O75083 606 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 FUT6P51993 359 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 TAF9Q16594 264 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 DPPA2Q7Z7J5 298 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 WDR31Q8NA23 367 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 OR2AK2Q8NG84 335 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 FAM57AQ8TBR7 257 aa18.35■□□□□ 0.53
SOX17-201ENST00000297316 EIF3KQ9UBQ5 218 aaKnown RBP18.35■□□□□ 0.53
SOX17-201ENST00000297316 FIGNL2A6NMB9 653 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 SFTPBP07988 381 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 MALLQ13021 153 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 NKAPLQ5M9Q1 402 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 DCAF12L2Q5VW00 463 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 BATF2Q8N1L9 274 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 CCDC120Q96HB5 630 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 HDHD3Q9BSH5 251 aaPredicted RBP18.34■□□□□ 0.53
SOX17-201ENST00000297316 ST6GALNAC5Q9BVH7 336 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 PAPOLGQ9BWT3 736 aaKnown RBP18.34■□□□□ 0.53
SOX17-201ENST00000297316 OR2A4O95047 310 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 CNOT4O95628 575 aaKnown RBP18.34■□□□□ 0.53
SOX17-201ENST00000297316 IL32P24001 234 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 PDZK1IP1Q13113 114 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 PIGYQ3MUY2 71 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 TOR2AQ5JU69 321 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 SUN5Q8TC36 379 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 WBP1Q96G27 269 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 OR2A7Q96R45 310 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 SLC7A11Q9UPY5 501 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 PCNX1Q96RV3 2341 aa18.34■□□□□ 0.53
SOX17-201ENST00000297316 HEATR1Q9H583 2144 aaKnown RBP18.33■□□□□ 0.53
SOX17-201ENST00000297316 GOSR2O14653 212 aa18.33■□□□□ 0.53
SOX17-201ENST00000297316 MPC2O95563 127 aa18.33■□□□□ 0.53
SOX17-201ENST00000297316 CSTBP04080 98 aaKnown RBP18.33■□□□□ 0.53
SOX17-201ENST00000297316 ATP1B3P54709 279 aa18.33■□□□□ 0.53
SOX17-201ENST00000297316 ERVS71-1P61550 626 aa18.33■□□□□ 0.53
SOX17-201ENST00000297316 SNRNP40Q96DI7 357 aaKnown RBP18.33■□□□□ 0.53
SOX17-201ENST00000297316 IGKV1D-8A0A087WSZ0 117 aa18.33■□□□□ 0.52
SOX17-201ENST00000297316 IL2RAP01589 272 aa18.33■□□□□ 0.52
SOX17-201ENST00000297316 GIPP09681 153 aaPredicted RBP18.33■□□□□ 0.52
SOX17-201ENST00000297316 TBC1D28Q2M2D7 210 aa18.33■□□□□ 0.52
SOX17-201ENST00000297316 HOGA1Q86XE5 327 aa18.33■□□□□ 0.52
SOX17-201ENST00000297316 HPSE2Q8WWQ2 592 aa18.33■□□□□ 0.52
SOX17-201ENST00000297316 MYOZ1Q9NP98 299 aaPredicted RBP18.33■□□□□ 0.52
SOX17-201ENST00000297316 TBPP20226 339 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 PRDX4Q13162 271 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 DHRS2Q13268 280 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 EXOSC2Q13868 293 aaKnown RBP18.32■□□□□ 0.52
SOX17-201ENST00000297316 IGFBP7Q16270 282 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 ADAD2Q8NCV1 583 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms