RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 LINC00518Q8N0U6 118 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 DMBX1Q8NFW5 382 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 REEP6Q96HR9 211 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 S1PR5Q9H228 398 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 CES1P1Q9UKY3 287 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 LRRC37AA6NMS7 1700 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 H3BMH7 237 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 GREM1O60565 184 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 FABP4P15090 132 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 SPINK2P20155 84 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 STARD6P59095 220 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 ZNF117Q03924 483 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 SLC38A9Q8NBW4 561 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 MRPS24Q96EL2 167 aaKnown RBP11.93□□□□□ -0.5
HPS3-201ENST00000296051 AMELYQ99218 206 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 RER1O15258 196 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 GPR37O15354 613 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 PTGFRP43088 359 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 UCNP55089 124 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 GRB2P62993 217 aaKnown RBP11.93□□□□□ -0.5
HPS3-201ENST00000296051 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 C1orf87Q8N0U7 546 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 RPUSD4Q96CM3 377 aaKnown RBP11.93□□□□□ -0.5
HPS3-201ENST00000296051 SPRY1O43609 319 aaPredicted RBP11.92□□□□□ -0.5
HPS3-201ENST00000296051 CDC14BO60729 498 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 DUS4LO95620 317 aaKnown RBP11.92□□□□□ -0.5
HPS3-201ENST00000296051 RAB31Q13636 194 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 GLRX5Q86SX6 157 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 ANK1P16157 1881 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 CADP27708 2225 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 ESPL1Q14674 2120 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 OR5H15A6NDH6 313 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 TOX3O15405 576 aaPredicted RBP11.92□□□□□ -0.5
HPS3-201ENST00000296051 SOCS1O15524 211 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 CLDN1O95832 211 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 ONECUT2O95948 504 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 RCC1P18754 421 aaPredicted RBP11.92□□□□□ -0.5
HPS3-201ENST00000296051 ARR3P36575 388 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 SLC25A1P53007 311 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 OR51F2Q8NH61 342 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 RDH5Q92781 318 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 HIPK2Q9H2X6 1198 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 NECAP2Q9NVZ3 263 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 KCNE5Q9UJ90 142 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 KIF26BQ2KJY2 2108 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 PIGBOS1A0A0B4J2F0 54 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 RECKO95980 971 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 THY1P04216 161 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 WDR74Q6RFH5 385 aaPredicted RBP11.92□□□□□ -0.5
HPS3-201ENST00000296051 OVCH2Q7RTZ1 564 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 THNSL2Q86YJ6 484 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 UBAC2Q8NBM4 344 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 LOXL4Q96JB6 756 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 TRBV23-1A0A0A0MS06 115 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 SPRY3O43610 288 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 PTP4A3O75365 173 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 TMEM33P57088 247 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 IL34Q6ZMJ4 242 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 CABLES2Q9BTV7 478 aa11.92□□□□□ -0.5
HPS3-201ENST00000296051 ZMAT5Q9UDW3 170 aaKnown RBP11.92□□□□□ -0.5
HPS3-201ENST00000296051 OR6C6A6NF89 314 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 NUDT19A8MXV4 375 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 E5RGE8 158 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 RAB27BO00194 218 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 ADRA2CP18825 462 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 OR3A4PP47883 348 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 RAB1AP62820 205 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 DGAT2L6Q6ZPD8 337 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 FBXL14Q8N1E6 418 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 UBALD1Q8TB05 177 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 RTL8AQ9BWD3 113 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 NSG2Q9Y328 171 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 C7orf77A4D0Y5 90 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 DEGS1O15121 323 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 LYZL6O75951 148 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 CNIH1O95406 144 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 RPS2P15880 293 aaKnown RBP11.91□□□□□ -0.5
HPS3-201ENST00000296051 G0S2P27469 103 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 DUSP1P28562 367 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 FZD5Q13467 585 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 CLEC18BQ6UXF7 455 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 FAM185AQ8N0U4 392 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 ADAM10O14672 748 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 NKX2-8O15522 239 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 SPINT2O43291 252 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 MOGAT2Q3SYC2 334 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 THEM4Q5T1C6 240 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 DOK3Q7L591 496 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 SERTAD4Q9NUC0 356 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 TMEM74BQ9NUR3 256 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
HPS3-201ENST00000296051 DICER1Q9UPY3 1922 aaKnown RBP11.91□□□□□ -0.5
HPS3-201ENST00000296051 A0A087WV48 116 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 ZNF727A8MUV8 499 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 GPR137BO60478 399 aa11.9□□□□□ -0.5
HPS3-201ENST00000296051 HBE1P02100 147 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms