RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 SLC25A30Q5SVS4 291 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 PRDM7Q9NQW5 492 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 SH2D7A6NKC9 451 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 H3BP45 60 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 PJVKQ0ZLH3 352 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 OR6C1Q96RD1 312 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 SCGB1A1P11684 91 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 SULT1A1P50225 295 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 GPR137Q96N19 417 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 KCNK15Q9H427 330 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 IL5P05113 134 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 ASCL1P50553 236 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 TMEM230Q96A57 120 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 DERL3Q96Q80 235 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 PBOV1Q9GZY1 135 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 A0A0B4J2E0 115 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 A0A1B0GX12 115 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 CNRIP1Q96F85 164 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 TWSG1Q9GZX9 223 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 MIOXQ9UGB7 285 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 IGHV3-9P01782 118 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 SP1P08047 785 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 HLXQ14774 488 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 ELAVL1Q15717 326 aaKnown RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 CA13Q8N1Q1 262 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF383Q8NA42 475 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 GALMQ96C23 342 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 TMEM9BQ9NQ34 198 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 TBX21Q9UL17 535 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 IGHEP01854 428 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 LPAL2Q16609 132 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF628Q5EBL2 1059 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 FAM78BQ5VT40 261 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 LSRQ86X29 649 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 FAM24BQ8N5W8 94 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 TMEM229BQ8NBD8 167 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 ADAT1Q9BUB4 502 aaKnown RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 DEDDO75618 318 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 ITGBL1O95965 494 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 CCR2P41597 374 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 OR5C1Q8NGR4 320 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 OR1L4Q8NGR5 311 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 TTC9Q92623 222 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 ALG14Q96F25 216 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 EXOGQ9Y2C4 368 aaKnown RBP8.85□□□□□ -0.99
COL6A3-201ENST00000295550 PAM16Q9Y3D7 125 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 SERPINE3A8MV23 424 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 CD96P40200 585 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 TGIF2LXQ8IUE1 241 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF547Q8IVP9 402 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 LAT2Q9GZY6 243 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 FCMRO60667 390 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 GOSR1O95249 250 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 EIF4EBP2Q13542 120 aaPredicted RBP8.84□□□□□ -0.99
COL6A3-201ENST00000295550 RNF2Q99496 336 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 TIMM10BQ9Y5J6 103 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF785A8K8V0 405 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 FAM87AP0C7U9 286 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 CAPZBP47756 277 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 RPL18Q07020 188 aaKnown RBP8.84□□□□□ -0.99
COL6A3-201ENST00000295550 SLC25A22Q9H936 323 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF121P58317 390 aaPredicted RBP8.84□□□□□ -0.99
COL6A3-201ENST00000295550 ELFN2Q5R3F8 820 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 OR1L3Q8NH93 324 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 ANKRD10Q9NXR5 420 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 CREBBPQ92793 2442 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 FBLL1A6NHQ2 334 aaKnown RBP8.84□□□□□ -0.99
COL6A3-201ENST00000295550 CYB561P49447 251 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 IRF3Q14653 427 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 OR8A1Q8NGG7 326 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 RHBDD1Q8TEB9 315 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 LPAR3Q9UBY5 353 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 IL17BQ9UHF5 180 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 TET1Q8NFU7 2136 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 ST8SIA5O15466 376 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 HERVK_113P61574 105 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 OR2T10Q8NGZ9 312 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 EDAQ92838 391 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 KLK11Q9UBX7 282 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 IGHV3-64DA0A0J9YX35 117 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 CDRT15L2A8MXV6 281 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 CLDN34H7C241 214 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 SOX15O60248 233 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 SLC25A5P05141 298 aaKnown RBP8.84□□□□□ -0.99
COL6A3-201ENST00000295550 EMDP50402 254 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 AWAT1Q58HT5 328 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 LSMEM1Q8N8F7 131 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 FBLIM1Q8WUP2 373 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 EMC6Q9BV81 110 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 GLRA1P23415 457 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 SLC38A11Q08AI6 406 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 IL10RAQ13651 578 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 CLPPQ16740 277 aaPredicted RBP8.84□□□□□ -0.99
COL6A3-201ENST00000295550 DND1Q8IYX4 353 aaKnown RBP8.84□□□□□ -0.99
COL6A3-201ENST00000295550 EDARADDQ8WWZ3 215 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 STARD4Q96DR4 205 aa8.84□□□□□ -0.99
COL6A3-201ENST00000295550 OR3A1P47881 315 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms