RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HOXD4P09016 255 aaPredicted RBP7.88□□□□□ -1.15
PDPN-201ENST00000294489 ZNF14P17017 642 aaPredicted RBP7.88□□□□□ -1.15
PDPN-201ENST00000294489 ZNF81P51508 661 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 UCNP55089 124 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 GABRA6Q16445 453 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 EIF2S3LQ2VIR3 472 aaKnown RBP7.88□□□□□ -1.15
PDPN-201ENST00000294489 LIN54Q6MZP7 749 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 C17orf107Q6ZR85 190 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 ZSCAN4Q8NAM6 433 aaPredicted RBP7.88□□□□□ -1.15
PDPN-201ENST00000294489 NAXEQ8NCW5 288 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 OR5M9Q8NGP3 310 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 HIST1H2AAQ96QV6 131 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 ZNF701Q9NV72 531 aaPredicted RBP7.88□□□□□ -1.15
PDPN-201ENST00000294489 OPN4Q9UHM6 478 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 TP53TG5Q9Y2B4 290 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 STARD10Q9Y365 291 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 NOP16Q9Y3C1 178 aaKnown RBP7.88□□□□□ -1.15
PDPN-201ENST00000294489 FAM215AQ9Y5M1 114 aa7.88□□□□□ -1.15
PDPN-201ENST00000294489 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
PDPN-201ENST00000294489 OR2AT4A6NND4 320 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 ZNHIT1O43257 154 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 CD34P28906 385 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 TIMP3P35625 211 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 H2BFSP57053 126 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 TMPRSS3P57727 454 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 TAS2R31P59538 309 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 GMFBP60983 142 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 UBE2NP61088 152 aaKnown RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 IL13RA1P78552 427 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 PRDX4Q13162 271 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 CHRFAM7AQ494W8 412 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 ZDHHC23Q8IYP9 409 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 ZNF611Q8N823 705 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 STARD4Q96DR4 205 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 GPR160Q9UJ42 338 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 EDARQ9UNE0 448 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 G3V3Q6 166 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 RRP8O43159 456 aaKnown RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 SIX6O95475 246 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 CST4P01036 141 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 NGFP01138 241 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 TPOP07202 933 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 ZNF35P13682 527 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 MRPL49Q13405 166 aaKnown RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 HLXQ14774 488 aaPredicted RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 TBC1D28Q2M2D7 210 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 LGALSLQ3ZCW2 172 aaPredicted RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 LPCAT3Q6P1A2 487 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 LYG2Q86SG7 212 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 MDP1Q86V88 176 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 GCNT2Q8N0V5 402 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 SLC30A7Q8NEW0 376 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 OR5AP2Q8NGF4 316 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 FAM57AQ8TBR7 257 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 MARCH1Q8TCQ1 289 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 EMG1Q92979 244 aaKnown RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 MRGPRFQ96AM1 343 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 CLEC4MQ9H2X3 399 aaPredicted RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 ZNF230Q9UIE0 474 aaPredicted RBP7.87□□□□□ -1.15
PDPN-201ENST00000294489 TUBD1Q9UJT1 453 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 ST3GAL6Q9Y274 331 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 IGKV1-12A0A0C4DH73 117 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 IGKV1D-12P01611 117 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 AKR1C4P17516 323 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 FOXF2Q12947 444 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 C2orf68Q2NKX9 166 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 CEACAM21Q3KPI0 293 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 C1orf185Q5T7R7 199 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 VWA1Q6PCB0 445 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 SLC25A26Q70HW3 274 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 FBXL14Q8N1E6 418 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 CNEP1R1Q8N9A8 125 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 OR8H1Q8NGG4 311 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 POM121Q96HA1 1249 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 PHB2Q99623 299 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 TMPRSS13Q9BYE2 586 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 PPA2Q9H2U2 334 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 EHFQ9NZC4 300 aa7.87□□□□□ -1.15
PDPN-201ENST00000294489 FIGNL2A6NMB9 653 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 ANKRD30BLA7E2S9 258 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 CD300LBA8K4G0 201 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 SFTPBP07988 381 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 S100A1P23297 94 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 VAMP1P23763 118 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 ZBTB25P24278 435 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 CEACAM8P31997 349 aaPredicted RBP7.86□□□□□ -1.15
PDPN-201ENST00000294489 WNT5AP41221 380 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 ARPC4P59998 168 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 PPP1R1AQ13522 171 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 C17orf78Q8N4C9 275 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 FAM169BQ8N8A8 192 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 WBP1Q96G27 269 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 CMSS1Q9BQ75 279 aaKnown RBP7.86□□□□□ -1.15
PDPN-201ENST00000294489 FAAP24Q9BTP7 215 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 SLC23A1Q9UHI7 598 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 ZNF835Q9Y2P0 537 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 BSNQ9UPA5 3926 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 PQLC2LA1A4F0 135 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 C9orf170A2RU37 121 aa7.86□□□□□ -1.15
PDPN-201ENST00000294489 GEMIN2O14893 280 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms