RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 DHRS13Q6UX07 377 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 PTP4A1Q93096 173 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 CXXC4Q9H2H0 198 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 AMDHD2Q9Y303 409 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
PTCD1-201ENST00000292478 MVDP53602 400 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 LIMK1P53667 647 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 TMEM211Q6ICI0 200 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 CT55Q8WUE5 264 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 DHRS9Q9BPW9 319 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 NMES1Q9C002 83 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 FKBP11Q9NYL4 201 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 SPRY3O43610 288 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 CYTIPO60759 359 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 ERGP11308 486 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 CTRB1P17538 263 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 CA6P23280 308 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 PJVKQ0ZLH3 352 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 ATP6V1FQ16864 119 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 CTRB2Q6GPI1 263 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 FRRS1LQ9P0K9 344 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 OR2M5A3KFT3 312 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 M0R1X1 148 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 MPC2O95563 127 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 PPP1CBP62140 327 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 SMRP1Q8NCR6 262 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 A0A1B0GTH9 108 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 NGFRP08138 427 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 SLC25A4P12235 298 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF17P17021 662 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 GGTLC2Q14390 218 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF574Q6ZN55 896 aaPredicted RBP11.34□□□□□ -0.59
PTCD1-201ENST00000292478 C6orf201Q7Z4U5 140 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 OR5M9Q8NGP3 310 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 ERRFI1Q9UJM3 462 aaPredicted RBP11.34□□□□□ -0.59
PTCD1-201ENST00000292478 TCFL5Q9UL49 500 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 SDHBP21912 280 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 CD82P27701 267 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF705AQ6ZN79 300 aaPredicted RBP11.34□□□□□ -0.59
PTCD1-201ENST00000292478 CMBLQ96DG6 245 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 POMT1Q9Y6A1 747 aa11.34□□□□□ -0.59
PTCD1-201ENST00000292478 GABRA1P14867 456 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 PEBP1P30086 187 aaKnown RBP11.33□□□□□ -0.6
PTCD1-201ENST00000292478 CNN1P51911 297 aaKnown RBP11.33□□□□□ -0.6
PTCD1-201ENST00000292478 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF251Q9BRH9 671 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 FGF2P09038 288 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 SPP1P10451 314 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 TLE1Q04724 770 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 GUK1Q16774 197 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 GGNBP1Q5YKI7 109 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 SARGQ9BW04 601 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 SDK1Q7Z5N4 2213 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 A0A1W2PQF6 199 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 OR4C45A6NMZ5 311 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 MASP2O00187 686 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 ADAM20O43506 726 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 INHBBP09529 407 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 PTHLHP12272 177 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 ZBTB44Q8NCP5 570 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF426Q9BUY5 554 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 GAL3ST2Q9H3Q3 398 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 ZNF230Q9UIE0 474 aaPredicted RBP11.33□□□□□ -0.6
PTCD1-201ENST00000292478 UBE2L5PA0A1B0GUS4 154 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 SPINT1O43278 529 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 LPAR6P43657 344 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 COL19A1Q14993 1142 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 FAM109BQ6ICB4 259 aaPredicted RBP11.33□□□□□ -0.6
PTCD1-201ENST00000292478 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 V9GYS6 101 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 PLXNB2O15031 1838 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 KLK10O43240 276 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 MPZL1O95297 269 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 SFTA3P0C7M3 94 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 TM4SF19Q96DZ7 209 aa11.33□□□□□ -0.6
PTCD1-201ENST00000292478 G3V3Q6 166 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 CST7O76096 145 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 YIF1AO95070 293 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
PTCD1-201ENST00000292478 TRIP6Q15654 476 aaKnown RBP11.32□□□□□ -0.6
PTCD1-201ENST00000292478 SP6Q3SY56 376 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM108Q6UXF1 575 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 RNF133Q8WVZ7 376 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 ADTRPQ96IZ2 230 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 GAR1Q9NY12 217 aaKnown RBP11.32□□□□□ -0.6
PTCD1-201ENST00000292478 LSM2Q9Y333 95 aaKnown RBP11.32□□□□□ -0.6
PTCD1-201ENST00000292478 PTP4A3O75365 173 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 RAB5AP20339 215 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 CALCRP30988 508 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 ZP4Q12836 540 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 RNF212Q495C1 297 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 RAB32Q13637 225 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 PTX4Q96A99 478 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 NIT2Q9NQR4 276 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 TIMM9Q9Y5J7 89 aa11.32□□□□□ -0.6
PTCD1-201ENST00000292478 COL4A5P29400 1685 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms