RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 LINC00587B1AMM8 73 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 DVL1O14640 695 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 TCF21O43680 179 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 DUS4LO95620 317 aaKnown RBP10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 ZNF85Q03923 595 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 LAIR2Q6ISS4 152 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 CD300LDQ6UXZ3 194 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 LDLRAD3Q86YD5 345 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 NRIP2Q9BQI9 281 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 H3BP45 60 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 CLN5O75503 358 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 CRHP06850 196 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 SP6Q3SY56 376 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 ZNF813Q6ZN06 617 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 TMEM91Q6ZNR0 172 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 OIT3Q8WWZ8 545 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 MRPS24Q96EL2 167 aaKnown RBP10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 ADGRL4Q9HBW9 690 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC35D1Q9NTN3 355 aa10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 RCL1Q9Y2P8 373 aaKnown RBP10.12□□□□□ -0.79
NPC1L1-201ENST00000289547 FAM221AA4D161 298 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 F6UZH7 168 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 TRAF3IP2O43734 574 aaPredicted RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 PRSS41Q7RTY9 318 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 MAML2Q8IZL2 1156 aaPredicted RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC35G3Q8N808 338 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 CTDSP1Q9GZU7 261 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 SHARPINQ9H0F6 387 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 DNAJB11Q9UBS4 358 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 MFNGO00587 321 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 GSTP1P09211 210 aaKnown RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 CD200P41217 278 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 CATR1Q13166 79 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 C17orf78Q8N4C9 275 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 GPX8Q8TED1 209 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC39A7Q92504 469 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 ZNF775Q96BV0 537 aaPredicted RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 PATJQ8NI35 1801 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 OR2W5A6NFC9 320 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 M0QZK8 103 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 GGCTO75223 188 aaKnown RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 RPLP1P05386 114 aaKnown RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 LIFP15018 202 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 PCBP3P57721 371 aaKnown RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 HLA-DRB3P79483 266 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 CYB5R2Q6BCY4 276 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 ARIH2OSQ8N7S6 290 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 OR11L1Q8NGX0 322 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 PPP1R35Q8TAP8 253 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 KCNJ15Q99712 375 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 SIGLEC7Q9Y286 467 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC5A6Q9Y289 635 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 CXCL13O43927 109 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 TUSC2O75896 110 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 TTRP02766 147 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 PMCHP20382 165 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 TMEM33P57088 247 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 RAE1P78406 368 aaKnown RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 PMP22Q01453 160 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 RPL18Q07020 188 aaKnown RBP10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 TBC1D28Q2M2D7 210 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 GCNT2Q8N0V5 402 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 TLNRD1Q9H1K6 362 aa10.11□□□□□ -0.79
NPC1L1-201ENST00000289547 FFAR1O14842 300 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 GEMIN2O14893 280 aaKnown RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 ACTL6BO94805 426 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 RGP1Q92546 391 aaPredicted RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 GPR37O15354 613 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 AGFG2O95081 481 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 DDTP30046 118 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 PEBP1P30086 187 aaKnown RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC37A1P57057 533 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 ZNF92Q03936 586 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 PCK2Q16822 640 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 NHLRC3Q5JS37 347 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 DMKNQ6E0U4 476 aaPredicted RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 ZG16BQ96DA0 208 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 SDHCQ99643 169 aaPredicted RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 CHRNA10Q9GZZ6 450 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 RAB9BQ9NP90 201 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 C20orf141Q9NUB4 165 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 TRAPPC2LQ9UL33 140 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 LOC102724200A0A096LPH7 203 aaPredicted RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 NKX2-2O95096 273 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 SFT2D2O95562 160 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 GPANK1O95872 356 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 CD59P13987 128 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 SRD5A2P31213 254 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 GALR1P47211 349 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 THBS3P49746 956 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 SOX8P57073 446 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 CD81P60033 236 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 PPP1CBP62140 327 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 RNPS1Q15287 305 aaKnown RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 UBE2V2Q15819 145 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 PRICKLE4Q2TBC4 344 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms