RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ZGRF1Q86YA3 2104 aa18.02■□□□□ 0.48
YBX3-202ENST00000279550 G3V3Q6 166 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 TGFBR3Q03167 851 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 MALLQ13021 153 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 PDZK1IP1Q13113 114 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 PRDX4Q13162 271 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 C17orf107Q6ZR85 190 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 RFPL4BQ6ZWI9 263 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 C6orf201Q7Z4U5 140 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 ZNF610Q8N9Z0 462 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 OR4K15Q8NH41 348 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 NANOS1Q8WY41 292 aaKnown RBP18.01■□□□□ 0.47
YBX3-202ENST00000279550 RADILQ96JH8 1075 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 OPN3Q9H1Y3 402 aaPredicted RBP18.01■□□□□ 0.47
YBX3-202ENST00000279550 ZNF629Q9UEG4 869 aaPredicted RBP18.01■□□□□ 0.47
YBX3-202ENST00000279550 PLEKHA6Q9Y2H5 1048 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 OR2AT4A6NND4 320 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 MSTNO14793 375 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 RGS13O14921 159 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 LYZL6O75951 148 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 CELA3BP08861 270 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 COX5AP20674 150 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 SNRPD2P62316 118 aaKnown RBP18.01■□□□□ 0.47
YBX3-202ENST00000279550 TSC22D1Q15714 1073 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 NCCRP1Q6ZVX7 275 aaPredicted RBP18.01■□□□□ 0.47
YBX3-202ENST00000279550 TMED4Q7Z7H5 227 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 CALHM1Q8IU99 346 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 C9orf62Q8N4C0 152 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 SLC30A7Q8NEW0 376 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 MAFIPQ8WZ33 124 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 PRRT1Q99946 306 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 PAPOLGQ9BWT3 736 aaKnown RBP18.01■□□□□ 0.47
YBX3-202ENST00000279550 CHIAQ9BZP6 476 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 OR51B6Q9H340 312 aa18.01■□□□□ 0.47
YBX3-202ENST00000279550 EIF3KQ9UBQ5 218 aaKnown RBP18.01■□□□□ 0.47
YBX3-202ENST00000279550 FAM172BPA6NC97 362 aa18■□□□□ 0.47
YBX3-202ENST00000279550 SERPINA5P05154 406 aa18■□□□□ 0.47
YBX3-202ENST00000279550 TBPP20226 339 aa18■□□□□ 0.47
YBX3-202ENST00000279550 HPSE2Q8WWQ2 592 aa18■□□□□ 0.47
YBX3-202ENST00000279550 HYLS1Q96M11 299 aa18■□□□□ 0.47
YBX3-202ENST00000279550 TECTBQ96PL2 329 aa18■□□□□ 0.47
YBX3-202ENST00000279550 ALX4Q9H161 411 aaPredicted RBP18■□□□□ 0.47
YBX3-202ENST00000279550 ZNF230Q9UIE0 474 aaPredicted RBP18■□□□□ 0.47
YBX3-202ENST00000279550 A0A0G2JNJ9 132 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 PQLC2LA1A4F0 135 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 CSTBP04080 98 aaKnown RBP17.99■□□□□ 0.47
YBX3-202ENST00000279550 SFTPBP07988 381 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 TAF9Q16594 264 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 PIGYQ3MUY2 71 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 NKAPLQ5M9Q1 402 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 HOGA1Q86XE5 327 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 PXT1Q8NFP0 134 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 HDHD3Q9BSH5 251 aaPredicted RBP17.99■□□□□ 0.47
YBX3-202ENST00000279550 FN3KRPQ9HA64 309 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 MYOZ1Q9NP98 299 aaPredicted RBP17.99■□□□□ 0.47
YBX3-202ENST00000279550 Q9UFV3 132 aa17.99■□□□□ 0.47
YBX3-202ENST00000279550 LILRA1O75019 489 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 CST4P01036 141 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 OR4E1P0C645 316 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 ZNF14P17017 642 aaPredicted RBP17.98■□□□□ 0.47
YBX3-202ENST00000279550 CBX5P45973 191 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 CASP6P55212 293 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 ZMYND11Q15326 602 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 GABRA6Q16445 453 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 C4orf46Q504U0 113 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 BEND4Q6ZU67 534 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 GRPEL2Q8TAA5 225 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 ZNF431Q8TF32 576 aaPredicted RBP17.98■□□□□ 0.47
YBX3-202ENST00000279550 VKORC1Q9BQB6 163 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 ST6GALNAC5Q9BVH7 336 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 IL36GQ9NZH8 169 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 MGAT4AQ9UM21 535 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 INTS1Q8N201 2190 aaKnown RBP17.98■□□□□ 0.47
YBX3-202ENST00000279550 SHANK1Q9Y566 2161 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 TRGV8A0A0C4DH27 118 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 UBE2QL1A1L167 161 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 CD300LBA8K4G0 201 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 CA11O75493 328 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 SIX6O95475 246 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 AMY2BP19961 511 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 OPRM1P35372 400 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 FBXL14Q8N1E6 418 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 BATF2Q8N1L9 274 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 ASCC1Q8N9N2 400 aaKnown RBP17.98■□□□□ 0.47
YBX3-202ENST00000279550 OR51F2Q8NH61 342 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 EMG1Q92979 244 aaKnown RBP17.98■□□□□ 0.47
YBX3-202ENST00000279550 RANBP3Q9H6Z4 567 aaPredicted RBP17.98■□□□□ 0.47
YBX3-202ENST00000279550 HSPB11Q9Y547 144 aa17.98■□□□□ 0.47
YBX3-202ENST00000279550 SERPINE3A8MV23 424 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 BMP5P22003 454 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 CHATP28329 748 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 CA7P43166 264 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 P2RY6Q15077 328 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 VAX1Q5SQQ9 334 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 SLC25A26Q70HW3 274 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 ZDHHC23Q8IYP9 409 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 OSR2Q8N2R0 312 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 ZNF611Q8N823 705 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 BHLHE23Q8NDY6 225 aa17.97■□□□□ 0.47
YBX3-202ENST00000279550 C1orf162Q8NEQ5 155 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms