RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 NPBWR2P48146 333 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 ERVK11-1P61568 191 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 PPP3R1P63098 170 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 KISS1Q15726 138 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 NEDD8Q15843 81 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 MICBQ29980 383 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 ACP7Q6ZNF0 438 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 DCDC5Q6ZRR9 648 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 LURAP1LQ8IV03 231 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 LINC01356Q8N9X3 169 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 TSPAN14Q8NG11 270 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 TMIGD2Q96BF3 282 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 RAB39BQ96DA2 213 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 CCL13Q99616 98 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 ZNF696Q9H7X3 374 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 TMEM138Q9NPI0 162 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 CTSZQ9UBR2 303 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 MIOXQ9UGB7 285 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
SS18-202ENST00000269138 PHF1O43189 567 aaPredicted RBP10.63□□□□□ -0.71
SS18-202ENST00000269138 ADAM20O43506 726 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 FCN3O75636 299 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 NXPH2O95156 264 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 TGFAP01135 160 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 HEXAP06865 529 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 ACAA1P09110 424 aaPredicted RBP10.63□□□□□ -0.71
SS18-202ENST00000269138 CALCBP10092 127 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 FSTP19883 344 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 BCL3P20749 454 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 BDKRB2P30411 391 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 ZP1P60852 638 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 FABP5Q01469 135 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 STUMQ69YW2 141 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 C1QL2Q7Z5L3 287 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 FGFRL1Q8N441 504 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 OR51F2Q8NH61 342 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 ANGPTL6Q8NI99 470 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 FCGR1BQ92637 280 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 NEIL1Q96FI4 390 aaPredicted RBP10.63□□□□□ -0.71
SS18-202ENST00000269138 CEP19Q96LK0 163 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 NEK6Q9HC98 313 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 HES4Q9HCC6 221 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 CKLFQ9UBR5 152 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 FOXJ3Q9UPW0 622 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 IGKV1D-17A0A075B6S4 117 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 OR2AT4A6NND4 320 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 B4DSR2 109 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 GABRPO00591 440 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 MAGEB3O15480 346 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 RGS9O75916 674 aaPredicted RBP10.63□□□□□ -0.71
SS18-202ENST00000269138 MAS1P04201 325 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 ALDOBP05062 364 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 UCHL1P09936 223 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 TMEM225BP0DP42 221 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 PSG2P11465 335 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 SELLP14151 372 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 MAPK3P27361 379 aaPredicted RBP10.63□□□□□ -0.71
SS18-202ENST00000269138 GABRA5P31644 462 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 CEBPDP49716 269 aaPredicted RBP10.63□□□□□ -0.71
SS18-202ENST00000269138 LCN2P80188 198 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 KCNJ8Q15842 424 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 DDI2Q5TDH0 399 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 ZNF841Q6ZN19 808 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 MKXQ8IYA7 352 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 FAM216BQ8N7L0 139 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 GPER1Q99527 375 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 SMURF1Q9HCE7 757 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 YAE1D1Q9NRH1 226 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 RBFOX1Q9NWB1 397 aaKnown RBP10.63□□□□□ -0.71
SS18-202ENST00000269138 NDUFB11Q9NX14 153 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 RASL12Q9NYN1 266 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 IL36RNQ9UBH0 155 aa10.63□□□□□ -0.71
SS18-202ENST00000269138 A0A087WXM4 84 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 RFPL4AA6NLU0 287 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 KIAA1324LA8MWY0 1029 aaPredicted RBP10.62□□□□□ -0.71
SS18-202ENST00000269138 RFPL4AL1F8VTS6 287 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 TRAPPC2LH3BP13 241 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 NDUFA2O43678 99 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 MSMBP08118 114 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 ADRA2CP18825 462 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 GABRA2P47869 451 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 OR3A4PP47883 348 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 PITPNBP48739 271 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 TRAM1Q15629 374 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 SMIM21Q3B7S5 101 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 SYT6Q5T7P8 510 aaPredicted RBP10.62□□□□□ -0.71
SS18-202ENST00000269138 ATPAF1Q5TC12 328 aaPredicted RBP10.62□□□□□ -0.71
SS18-202ENST00000269138 LRRTM1Q86UE6 522 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 CD177Q8N6Q3 437 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 OR8B3Q8NGG8 313 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 TNFAIP8L1Q8WVP5 186 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 THRSPQ92748 146 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 MUL1Q969V5 352 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 C12orf43Q96C57 262 aaKnown RBP10.62□□□□□ -0.71
SS18-202ENST00000269138 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 OR8B2Q96RD0 313 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
SS18-202ENST00000269138 ZNF222Q9UK12 451 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms